Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.52□□□□□ -2.17
CKS1BP61024 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.52□□□□□ -2.17
CKS1BP61024 AC074051.3-201ENST00000570238 358 ntBASIC1.52□□□□□ -2.17
CKS1BP61024 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.52□□□□□ -2.17
CKS1BP61024 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.52□□□□□ -2.17
CKS1BP61024 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.52□□□□□ -2.17
CKS1BP61024 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.52□□□□□ -2.17
CKS1BP61024 AC079610.2-201ENST00000604818 690 ntBASIC1.52□□□□□ -2.17
CKS1BP61024 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.52□□□□□ -2.17
CKS1BP61024 AC068057.2-201ENST00000624047 895 ntBASIC1.52□□□□□ -2.17
CKS1BP61024 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.52□□□□□ -2.17
CKS1BP61024 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
CKS1BP61024 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CKS1BP61024 ZNF702P-202ENST00000434269 1966 ntBASIC1.52□□□□□ -2.17
CKS1BP61024 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CKS1BP61024 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.51□□□□□ -2.17
CKS1BP61024 ADAM3A-203ENST00000461344 2157 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AL049641.1-201ENST00000441055 1948 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
CKS1BP61024 RNU6-1159P-201ENST00000362933 107 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 SNORD82-201ENST00000365530 70 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AL356432.1-201ENST00000405809 419 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 RNA5SP489-201ENST00000410986 109 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 RPS20P15-201ENST00000412792 311 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.51□□□□□ -2.17
CKS1BP61024 AC107081.1-201ENST00000414975 361 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 PGBD4P6-201ENST00000421501 610 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AC003685.2-201ENST00000422795 395 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.51□□□□□ -2.17
CKS1BP61024 AL590383.1-201ENST00000428602 75 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.51□□□□□ -2.17
CKS1BP61024 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CKS1BP61024 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.51□□□□□ -2.17
CKS1BP61024 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.51□□□□□ -2.17
CKS1BP61024 AC025181.1-201ENST00000477507 416 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 RN7SL432P-201ENST00000484057 298 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CKS1BP61024 AC234781.5-201ENST00000508429 271 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AC006499.2-201ENST00000513470 337 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.51□□□□□ -2.17
CKS1BP61024 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.51□□□□□ -2.17
CKS1BP61024 AC103783.1-201ENST00000520506 373 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 UBTFL10-201ENST00000528532 562 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.51□□□□□ -2.17
CKS1BP61024 CBX3P7-201ENST00000532876 502 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 TRAV11-201ENST00000539512 339 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.51□□□□□ -2.17
CKS1BP61024 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.51□□□□□ -2.17
CKS1BP61024 LINC00933-203ENST00000559812 219 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AC115989.2-201ENST00000578640 563 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 LRRC37A5P-203ENST00000580181 585 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 MIR3199-1-201ENST00000582434 88 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.51□□□□□ -2.17
CKS1BP61024 AC007038.2-201ENST00000608095 740 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AC016542.1-201ENST00000608259 493 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AL592148.2-201ENST00000612210 372 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 MIR7106-201ENST00000612419 65 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 STMN1P1-201ENST00000617809 440 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AC009318.4-201ENST00000620496 486 ntBASIC1.51□□□□□ -2.17
CKS1BP61024 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.51□□□□□ -2.17
CKS1BP61024 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.51□□□□□ -2.17
CKS1BP61024 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CKS1BP61024 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CKS1BP61024 RNU4-42P-201ENST00000364738 142 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.5□□□□□ -2.17
CKS1BP61024 RNA5SP184-201ENST00000411071 108 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 RPL17P12-201ENST00000413391 526 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AL161449.1-201ENST00000414531 1199 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.5□□□□□ -2.17
CKS1BP61024 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.5□□□□□ -2.17
CKS1BP61024 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CKS1BP61024 NANOGP5-201ENST00000424456 877 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC024082.2-201ENST00000434771 238 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.5□□□□□ -2.17
CKS1BP61024 MTND1P33-201ENST00000446251 917 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AL021397.1-201ENST00000451806 248 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.5□□□□□ -2.17
CKS1BP61024 AC080013.2-201ENST00000460866 323 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC087884.1-201ENST00000469738 328 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.5□□□□□ -2.17
CKS1BP61024 AC004263.1-201ENST00000479327 332 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 RPS3AP14-201ENST00000483907 780 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 RPS27P23-201ENST00000487608 251 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.5□□□□□ -2.17
CKS1BP61024 HMGB1P1-201ENST00000522557 636 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 OR5AL2P-201ENST00000532185 920 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.5□□□□□ -2.17
CKS1BP61024 AL391261.3-201ENST00000557194 520 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.5□□□□□ -2.17
CKS1BP61024 AC012468.1-201ENST00000604888 430 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC135507.2-201ENST00000612443 309 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 MIR6817-201ENST00000615588 66 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC090132.2-201ENST00000615881 347 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 U4atac.1-201ENST00000618345 95 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.5□□□□□ -2.17
CKS1BP61024 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.5□□□□□ -2.17
CKS1BP61024 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CKS1BP61024 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
CKS1BP61024 HSPA8P4-201ENST00000511877 1920 ntBASIC1.5□□□□□ -2.17
CKS1BP61024 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms