Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNU6-236P-201ENST00000363886 106 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN18P56856 RNU6-1122P-201ENST00000384449 107 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 MIR34A-201ENST00000385130 110 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 MIR181B1-201ENST00000385240 110 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AL356057.3-201ENST00000402607 340 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AL450338.1-201ENST00000407987 512 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AL592310.1-201ENST00000414330 671 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN18P56856 AP000936.2-201ENST00000447151 681 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 DPPA3P1-201ENST00000448050 469 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 UBE2DNL-203ENST00000474922 222 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AC069306.1-201ENST00000507006 843 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AC087808.1-201ENST00000520501 361 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.42□□□□□ -2.02
CLDN18P56856 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN18P56856 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN18P56856 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN18P56856 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.42□□□□□ -2.02
CLDN18P56856 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.42□□□□□ -2.02
CLDN18P56856 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN18P56856 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN18P56856 AC090616.3-201ENST00000582184 217 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AC099785.1-201ENST00000605697 437 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AL390208.1-201ENST00000605885 644 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 SNHG22-203ENST00000617833 660 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 MIR6130-201ENST00000619419 109 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 AC068880.4-201ENST00000623082 495 ntBASIC2.42□□□□□ -2.02
CLDN18P56856 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN18P56856 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN18P56856 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN18P56856 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN18P56856 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN18P56856 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CLDN18P56856 ANKRD36P1-201ENST00000344424 659 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN18P56856 UBE2V1P2-201ENST00000397758 440 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN18P56856 RPS7P9-201ENST00000414704 586 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN18P56856 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 RPS15AP7-201ENST00000439294 405 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 AL049734.2-201ENST00000441066 616 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 FGF7P5-201ENST00000441829 291 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 MTCYBP42-201ENST00000444653 1130 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 BMI1P1-201ENST00000445879 941 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN18P56856 AC009961.3-201ENST00000449832 765 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CLDN18P56856 RN7SL432P-201ENST00000484057 298 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 FAM172BP-201ENST00000487497 1089 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN18P56856 RNA5SP291-201ENST00000517222 105 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN18P56856 GLYCAM1-201ENST00000546596 285 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 MIR3117-201ENST00000584034 78 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN18P56856 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN18P56856 AL161431.1-201ENST00000618966 4205 ntBASIC2.41□□□□□ -2.02
CLDN18P56856 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN18P56856 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
CLDN18P56856 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CLDN18P56856 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.4□□□□□ -2.02
CLDN18P56856 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN18P56856 Y_RNA.110-201ENST00000363220 99 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 Y_RNA.500-201ENST00000384466 111 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 U3.20-201ENST00000390909 217 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 SNORD88.1-201ENST00000408684 91 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 PPP1R11P2-201ENST00000423543 382 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 AC007919.1-201ENST00000429380 217 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 USP9YP22-201ENST00000438971 294 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN18P56856 AC002381.1-201ENST00000447049 280 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 LARP1BP2-201ENST00000486594 519 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 MTCYBP17-201ENST00000503579 789 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 AC093801.2-201ENST00000503966 1050 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN18P56856 MTCO3P27-201ENST00000514397 196 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN18P56856 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN18P56856 ATP5F1P5-201ENST00000526403 760 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 NDUFS5P6-201ENST00000529136 295 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 AC087276.1-201ENST00000529659 480 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN18P56856 AC023825.1-201ENST00000566704 1030 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN18P56856 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 AC084824.5-201ENST00000612009 413 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 AC034102.8-201ENST00000615146 484 ntBASIC2.4□□□□□ -2.03
CLDN18P56856 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLDN18P56856 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN18P56856 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN18P56856 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN18P56856 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN18P56856 AC135776.4-201ENST00000624300 1904 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CLDN18P56856 SNORA36C-201ENST00000384289 132 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms