Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU6-328P-201ENST00000390887 106 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 U3.30-201ENST00000391308 210 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.37□□□□□ -1.71
GFRA1P56159 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.37□□□□□ -1.71
GFRA1P56159 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.37□□□□□ -1.71
GFRA1P56159 GPM6BP2-201ENST00000432046 144 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 TXNP1-201ENST00000441872 371 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 GPM6BP1-201ENST00000446387 144 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.37□□□□□ -1.71
GFRA1P56159 RPS5P7-201ENST00000456664 608 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.37□□□□□ -1.71
GFRA1P56159 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 HMGB1P22-201ENST00000505315 124 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 RNU6-976P-201ENST00000516086 111 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 RNU6-1213P-201ENST00000517075 94 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.37□□□□□ -1.71
GFRA1P56159 AP001880.2-201ENST00000538233 448 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.37□□□□□ -1.71
GFRA1P56159 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GFRA1P56159 AC073539.2-201ENST00000597113 165 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.37□□□□□ -1.71
GFRA1P56159 AL121932.1-201ENST00000605542 214 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GFRA1P56159 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.37□□□□□ -1.71
GFRA1P56159 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GFRA1P56159 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
GFRA1P56159 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.37□□□□□ -1.71
GFRA1P56159 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.37□□□□□ -1.71
GFRA1P56159 AC074029.4-201ENST00000624796 1859 ntBASIC4.37□□□□□ -1.71
GFRA1P56159 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
GFRA1P56159 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.36□□□□□ -1.71
GFRA1P56159 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.36□□□□□ -1.71
GFRA1P56159 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.36□□□□□ -1.71
GFRA1P56159 RNU6-1167P-201ENST00000363227 94 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 SNORA75B-201ENST00000384053 137 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 RNU6-95P-201ENST00000384697 107 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
GFRA1P56159 MIR1290-201ENST00000408735 78 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 Y_RNA.646-201ENST00000410980 101 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 BX510359.2-201ENST00000417920 305 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 TOMM22P1-201ENST00000418578 312 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AL645608.4-201ENST00000423619 154 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.36□□□□□ -1.71
GFRA1P56159 AL137792.2-201ENST00000443484 235 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AL360271.2-201ENST00000447710 161 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.36□□□□□ -1.71
GFRA1P56159 AC084198.1-201ENST00000477747 402 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 RN7SL558P-201ENST00000497468 299 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AC097473.1-201ENST00000508142 408 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 SCARNA15.2-201ENST00000516409 127 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.36□□□□□ -1.71
GFRA1P56159 MED28P6-201ENST00000558776 231 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 SNORA74C-1-201ENST00000580726 201 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 MIR4270-201ENST00000581799 70 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AC022726.1-201ENST00000587475 207 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.36□□□□□ -1.71
GFRA1P56159 AP000654.2-201ENST00000605633 586 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AP002826.1-201ENST00000608835 315 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 FAM27B-201ENST00000610601 213 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.36□□□□□ -1.71
GFRA1P56159 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 AL031601.2-202ENST00000622650 282 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.36□□□□□ -1.71
GFRA1P56159 AC139713.2-214ENST00000642059 1811 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
GFRA1P56159 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 AC009643.2-201ENST00000603543 1448 ntBASIC4.36□□□□□ -1.71
GFRA1P56159 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
GFRA1P56159 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GFRA1P56159 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.36□□□□□ -1.71
GFRA1P56159 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 AC015813.6-201ENST00000624409 5808 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
GFRA1P56159 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
GFRA1P56159 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
GFRA1P56159 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 AL049641.1-201ENST00000441055 1948 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 Y_RNA.28-201ENST00000362554 111 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 Y_RNA.31-201ENST00000362574 102 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 Y_RNA.112-201ENST00000363250 102 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 RNU6-512P-201ENST00000364438 103 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 RNU6-1040P-201ENST00000383974 107 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 MIR578-201ENST00000384828 96 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 RNU6-308P-201ENST00000390957 107 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GFRA1P56159 RPL37P18-201ENST00000411602 243 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 CTSL3P-202ENST00000412179 788 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 PMCHL1-202ENST00000423102 261 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.35□□□□□ -1.71
GFRA1P56159 UBE2V1P4-201ENST00000425374 344 ntBASIC4.35□□□□□ -1.71
GFRA1P56159 AL356867.1-201ENST00000429623 299 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms