Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP000907.2-201ENST00000530827 353 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.26□□□□□ -1.89
PDX1P52945 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.26□□□□□ -1.89
PDX1P52945 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.26□□□□□ -1.89
PDX1P52945 MIR3690-201ENST00000580266 75 ntBASIC3.26□□□□□ -1.89
PDX1P52945 MIR4298-201ENST00000584380 73 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.26□□□□□ -1.89
PDX1P52945 AP001330.4-201ENST00000604350 154 ntBASIC3.26□□□□□ -1.89
PDX1P52945 RN7SKP299-201ENST00000606679 301 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AC064807.4-201ENST00000607201 407 ntBASIC3.26□□□□□ -1.89
PDX1P52945 OR10AB1P-201ENST00000609613 938 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AC135507.2-201ENST00000612443 309 ntBASIC3.26□□□□□ -1.89
PDX1P52945 RNVU1-4-201ENST00000612985 164 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AL590240.3-201ENST00000621416 943 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AL159972.1-201ENST00000625150 448 ntBASIC3.26□□□□□ -1.89
PDX1P52945 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.26□□□□□ -1.89
PDX1P52945 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.26□□□□□ -1.89
PDX1P52945 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDX1P52945 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDX1P52945 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.25□□□□□ -1.89
PDX1P52945 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDX1P52945 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDX1P52945 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PDX1P52945 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PDX1P52945 RNY4P24-201ENST00000362735 96 ntBASIC3.25□□□□□ -1.89
PDX1P52945 RNU5E-8P-201ENST00000363502 116 ntBASIC3.25□□□□□ -1.89
PDX1P52945 RNU6-297P-201ENST00000384636 107 ntBASIC3.25□□□□□ -1.89
PDX1P52945 UBA52P6-201ENST00000399822 382 ntBASIC3.25□□□□□ -1.89
PDX1P52945 HMGN1P14-201ENST00000412459 517 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AC063979.1-201ENST00000415539 377 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.25□□□□□ -1.89
PDX1P52945 AC233728.2-201ENST00000425348 757 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AC090774.1-201ENST00000435925 246 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AL353706.1-201ENST00000436728 494 ntBASIC3.25□□□□□ -1.89
PDX1P52945 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.25□□□□□ -1.89
PDX1P52945 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.25□□□□□ -1.89
PDX1P52945 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.25□□□□□ -1.89
PDX1P52945 MRPS31P2-201ENST00000451581 518 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.25□□□□□ -1.89
PDX1P52945 RNU6-956P-201ENST00000458868 103 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AC092451.1-201ENST00000480211 153 ntBASIC3.25□□□□□ -1.89
PDX1P52945 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 AC112204.1-201ENST00000502591 103 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.25□□□□□ -1.89
PDX1P52945 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 RNU2-58P-201ENST00000516403 183 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.25□□□□□ -1.89
PDX1P52945 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.25□□□□□ -1.89
PDX1P52945 AC006362.1-201ENST00000567392 174 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AL356432.3-201ENST00000568952 465 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AC064872.1-201ENST00000604823 1072 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AC009159.1-201ENST00000618386 642 ntBASIC3.25□□□□□ -1.89
PDX1P52945 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PDX1P52945 AC009878.1-201ENST00000621819 340 ntBASIC3.25□□□□□ -1.89
PDX1P52945 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
PDX1P52945 SCARNA4.1-201ENST00000628597 123 ntBASIC3.25□□□□□ -1.89
PDX1P52945 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.25□□□□□ -1.89
PDX1P52945 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PDX1P52945 AC009812.4-201ENST00000569134 1805 ntBASIC3.25□□□□□ -1.89
PDX1P52945 TAB3P1-202ENST00000452645 1634 ntBASIC3.25□□□□□ -1.89
PDX1P52945 AC092104.1-201ENST00000497346 1441 ntBASIC3.25□□□□□ -1.89
PDX1P52945 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDX1P52945 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.25□□□□□ -1.89
PDX1P52945 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
PDX1P52945 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDX1P52945 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PDX1P52945 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.24□□□□□ -1.89
PDX1P52945 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
PDX1P52945 SNORA51.2-201ENST00000364595 132 ntBASIC3.24□□□□□ -1.89
PDX1P52945 RNU4-91P-201ENST00000364778 135 ntBASIC3.24□□□□□ -1.89
PDX1P52945 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDX1P52945 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.24□□□□□ -1.89
PDX1P52945 RNU6-637P-201ENST00000384050 107 ntBASIC3.24□□□□□ -1.89
PDX1P52945 SNORD115.1-201ENST00000391109 76 ntBASIC3.24□□□□□ -1.89
PDX1P52945 MTCO2P34-201ENST00000421994 607 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.24□□□□□ -1.89
PDX1P52945 AL353777.1-201ENST00000425552 326 ntBASIC3.24□□□□□ -1.89
PDX1P52945 MTATP6P4-201ENST00000427725 675 ntBASIC3.24□□□□□ -1.89
PDX1P52945 VDAC1P3-201ENST00000434069 851 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AC024082.2-201ENST00000434771 238 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.24□□□□□ -1.89
PDX1P52945 RPL22P17-201ENST00000438729 315 ntBASIC3.24□□□□□ -1.89
PDX1P52945 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.24□□□□□ -1.89
PDX1P52945 AL357552.1-201ENST00000445254 415 ntBASIC3.24□□□□□ -1.89
PDX1P52945 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.24□□□□□ -1.89
PDX1P52945 AL592447.1-201ENST00000447592 540 ntBASIC3.24□□□□□ -1.89
PDX1P52945 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.24□□□□□ -1.89
PDX1P52945 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.24□□□□□ -1.89
PDX1P52945 RNA5SP269-201ENST00000459032 137 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AC006445.1-201ENST00000491925 405 ntBASIC3.24□□□□□ -1.89
PDX1P52945 MLLT10P2-201ENST00000506434 249 ntBASIC3.24□□□□□ -1.89
PDX1P52945 CBX3P3-201ENST00000508108 532 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.24□□□□□ -1.89
PDX1P52945 RNU6-201P-201ENST00000517100 61 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms