Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL451074.5-201ENST00000415894 435 ntBASIC3.12□□□□□ -1.91
GPC3P51654 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.12□□□□□ -1.91
GPC3P51654 SPA17P1-201ENST00000416656 452 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.12□□□□□ -1.91
GPC3P51654 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GPC3P51654 AC129850.1-201ENST00000436203 508 ntBASIC3.12□□□□□ -1.91
GPC3P51654 COX6CP2-201ENST00000444980 225 ntBASIC3.12□□□□□ -1.91
GPC3P51654 RPL18AP17-201ENST00000455326 198 ntBASIC3.12□□□□□ -1.91
GPC3P51654 snoU13.28-201ENST00000459235 104 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AL049874.1-201ENST00000489560 388 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AP001025.2-201ENST00000490908 477 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AC087373.1-201ENST00000524920 491 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AC125611.2-201ENST00000551907 647 ntBASIC3.12□□□□□ -1.91
GPC3P51654 NBEAP1-201ENST00000554452 979 ntBASIC3.12□□□□□ -1.91
GPC3P51654 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC3P51654 AL132657.2-201ENST00000564417 358 ntBASIC3.12□□□□□ -1.91
GPC3P51654 RPL23AP84-201ENST00000571193 464 ntBASIC3.12□□□□□ -1.91
GPC3P51654 MTND3P13-201ENST00000574391 343 ntBASIC3.12□□□□□ -1.91
GPC3P51654 BNIP3P26-201ENST00000600827 554 ntBASIC3.12□□□□□ -1.91
GPC3P51654 BBIP1P1-201ENST00000602999 279 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AL160237.3-201ENST00000604114 1013 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AL158211.4-201ENST00000606988 584 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AC090115.4-201ENST00000609970 188 ntBASIC3.12□□□□□ -1.91
GPC3P51654 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.12□□□□□ -1.91
GPC3P51654 Z99129.2-201ENST00000619967 314 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AC002550.2-201ENST00000621246 394 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AC010338.1-201ENST00000621823 717 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AC231657.1-201ENST00000624313 397 ntBASIC3.12□□□□□ -1.91
GPC3P51654 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.12□□□□□ -1.91
GPC3P51654 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC099786.3-201ENST00000565735 1410 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC008669.1-201ENST00000565823 2178 ntBASIC3.11□□□□□ -1.91
GPC3P51654 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC3P51654 AC062016.1-201ENST00000355719 319 ntBASIC3.11□□□□□ -1.91
GPC3P51654 RNU6-560P-201ENST00000364007 108 ntBASIC3.11□□□□□ -1.91
GPC3P51654 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
GPC3P51654 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC3P51654 NANOGP5-201ENST00000424456 877 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AL512844.2-201ENST00000433990 593 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC3P51654 AC108938.1-201ENST00000451204 136 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AL109741.2-201ENST00000455561 343 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC3P51654 GTF2IP9-201ENST00000502460 301 ntBASIC3.11□□□□□ -1.91
GPC3P51654 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GPC3P51654 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC3P51654 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC3P51654 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC3P51654 RPL23AP94-201ENST00000512518 302 ntBASIC3.11□□□□□ -1.91
GPC3P51654 SCARNA15.2-201ENST00000516409 127 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC3P51654 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.11□□□□□ -1.91
GPC3P51654 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC3P51654 AC124947.2-202ENST00000552735 133 ntBASIC3.11□□□□□ -1.91
GPC3P51654 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.11□□□□□ -1.91
GPC3P51654 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC3P51654 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC3P51654 MIR3162-201ENST00000581818 82 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC083760.1-201ENST00000589621 670 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC020895.1-201ENST00000595362 272 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AL157392.4-201ENST00000609756 345 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AP003485.2-201ENST00000623636 610 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC068787.1-201ENST00000623908 691 ntBASIC3.11□□□□□ -1.91
GPC3P51654 AC110079.1-202ENST00000635213 138 ntBASIC3.11□□□□□ -1.91
GPC3P51654 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
GPC3P51654 AC092447.7-201ENST00000422212 1621 ntBASIC3.11□□□□□ -1.91
GPC3P51654 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GPC3P51654 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GPC3P51654 AC010680.1-201ENST00000590024 3590 ntBASIC3.1□□□□□ -1.91
GPC3P51654 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC3P51654 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
GPC3P51654 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
GPC3P51654 MIR514A1-201ENST00000385133 98 ntBASIC3.1□□□□□ -1.91
GPC3P51654 RNA5SP184-201ENST00000411071 108 ntBASIC3.1□□□□□ -1.91
GPC3P51654 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
GPC3P51654 TIMM9P2-201ENST00000419324 266 ntBASIC3.1□□□□□ -1.91
GPC3P51654 AL513175.2-201ENST00000422071 443 ntBASIC3.1□□□□□ -1.91
GPC3P51654 NUP35P1-201ENST00000422734 947 ntBASIC3.1□□□□□ -1.91
GPC3P51654 AC018630.2-202ENST00000422992 927 ntBASIC3.1□□□□□ -1.91
GPC3P51654 AC092648.1-201ENST00000425870 423 ntBASIC3.1□□□□□ -1.91
GPC3P51654 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.1□□□□□ -1.91
GPC3P51654 OR10R1P-201ENST00000441524 1141 ntBASIC3.1□□□□□ -1.91
GPC3P51654 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.1□□□□□ -1.91
GPC3P51654 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC3P51654 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.1□□□□□ -1.91
GPC3P51654 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC3P51654 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC3P51654 AC092155.2-201ENST00000454675 477 ntBASIC3.1□□□□□ -1.91
GPC3P51654 AC097493.1-201ENST00000463958 372 ntBASIC3.1□□□□□ -1.91
GPC3P51654 RNU6-1282P-201ENST00000516735 96 ntBASIC3.1□□□□□ -1.91
GPC3P51654 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC3P51654 AL132857.1-201ENST00000555180 708 ntBASIC3.1□□□□□ -1.91
GPC3P51654 AMZ2P1-203ENST00000565833 850 ntBASIC3.1□□□□□ -1.91
GPC3P51654 MIR4513-201ENST00000581077 86 ntBASIC3.1□□□□□ -1.91
GPC3P51654 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
GPC3P51654 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.1□□□□□ -1.91
GPC3P51654 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.1□□□□□ -1.91
GPC3P51654 MTCO2P2-201ENST00000591258 225 ntBASIC3.1□□□□□ -1.91
GPC3P51654 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms