Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.69□□□□□ -1.34
PRIM1P49642 AL360270.2-201ENST00000562952 5985 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.69□□□□□ -1.34
PRIM1P49642 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PRIM1P49642 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PRIM1P49642 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PRIM1P49642 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PRIM1P49642 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.69□□□□□ -1.34
PRIM1P49642 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.69□□□□□ -1.34
PRIM1P49642 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PRIM1P49642 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PRIM1P49642 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
PRIM1P49642 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
PRIM1P49642 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRIM1P49642 Y_RNA.277-201ENST00000364754 102 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.68□□□□□ -1.34
PRIM1P49642 Y_RNA.439-201ENST00000384119 94 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 SNORA66-201ENST00000384792 133 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 RNA5SP332-201ENST00000391063 115 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 RPS29P13-201ENST00000402041 169 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 RNA5SP113-201ENST00000410486 84 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 RNU6-325P-201ENST00000411132 105 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.68□□□□□ -1.34
PRIM1P49642 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.68□□□□□ -1.34
PRIM1P49642 PIGFP3-201ENST00000441918 722 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PRIM1P49642 RN7SL319P-201ENST00000480656 221 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 RNU6-1338P-201ENST00000516328 91 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 AMZ2P1-203ENST00000565833 850 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.68□□□□□ -1.34
PRIM1P49642 AL391358.1-201ENST00000605342 190 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 MIR376A1-201ENST00000616574 68 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.68□□□□□ -1.34
PRIM1P49642 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PRIM1P49642 AC006206.1-201ENST00000544842 3387 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 Z95114.1-201ENST00000624264 14574 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.68□□□□□ -1.34
PRIM1P49642 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PRIM1P49642 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.68□□□□□ -1.34
PRIM1P49642 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
PRIM1P49642 LINC02555-201ENST00000563933 1951 ntBASIC6.68□□□□□ -1.34
PRIM1P49642 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 RNU4-44P-201ENST00000363050 141 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 MTCYBP2-201ENST00000407745 171 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 RNU6-130P-201ENST00000411112 103 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 RPL21P90-201ENST00000415692 466 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 AC073465.2-201ENST00000440938 498 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 LINC02210-201ENST00000444561 288 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.67□□□□□ -1.34
PRIM1P49642 RPS23P7-201ENST00000466210 444 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 AC087190.1-201ENST00000484462 480 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 AC107032.1-201ENST00000485945 480 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
PRIM1P49642 AC008716.1-201ENST00000511084 513 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 AC093023.1-201ENST00000547375 507 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 AC025884.1-201ENST00000556034 378 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.67□□□□□ -1.34
PRIM1P49642 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.67□□□□□ -1.34
PRIM1P49642 LRRC37A5P-203ENST00000580181 585 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 MIR5096-201ENST00000583713 70 ntBASIC6.67□□□□□ -1.34
PRIM1P49642 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.67□□□□□ -1.34
PRIM1P49642 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.67□□□□□ -1.34
PRIM1P49642 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PRIM1P49642 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PRIM1P49642 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PRIM1P49642 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRIM1P49642 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
PRIM1P49642 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
PRIM1P49642 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRIM1P49642 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRIM1P49642 U8.8-201ENST00000365399 135 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 RNU2-33P-201ENST00000410344 192 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 RPL18P10-201ENST00000425606 538 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 snoU13.1-201ENST00000459157 104 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 RNU6-1037P-201ENST00000459571 107 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 RPL7P49-201ENST00000471402 708 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 AC098869.1-201ENST00000481627 292 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 VN1R105P-201ENST00000486595 910 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.66□□□□□ -1.34
PRIM1P49642 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.66□□□□□ -1.34
PRIM1P49642 AC006427.1-201ENST00000514359 712 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.66□□□□□ -1.34
PRIM1P49642 AC004832.4-201ENST00000608952 331 ntBASIC6.66□□□□□ -1.34
PRIM1P49642 AC100757.1-201ENST00000616872 1835 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms