Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP9P49458 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP9P49458 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
SRP9P49458 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP9P49458 AP002826.1-201ENST00000608835 315 ntBASIC1.78□□□□□ -2.12
SRP9P49458 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
SRP9P49458 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SRP9P49458 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.78□□□□□ -2.13
SRP9P49458 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRP9P49458 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.77□□□□□ -2.13
SRP9P49458 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SRP9P49458 AL354685.2-201ENST00000448218 1447 ntBASIC1.77□□□□□ -2.13
SRP9P49458 RN7SKP226-201ENST00000364912 300 ntBASIC1.77□□□□□ -2.13
SRP9P49458 RNU6-891P-201ENST00000384280 111 ntBASIC1.77□□□□□ -2.13
SRP9P49458 RNU6-1197P-201ENST00000391183 107 ntBASIC1.77□□□□□ -2.13
SRP9P49458 FCF1P2-201ENST00000415284 583 ntBASIC1.77□□□□□ -2.13
SRP9P49458 LINC01347-201ENST00000417964 355 ntBASIC1.77□□□□□ -2.13
SRP9P49458 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP9P49458 HMGN2P19-201ENST00000425149 265 ntBASIC1.77□□□□□ -2.13
SRP9P49458 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP9P49458 MTND2P19-201ENST00000449129 1012 ntBASIC1.77□□□□□ -2.13
SRP9P49458 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.77□□□□□ -2.13
SRP9P49458 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP9P49458 AC055731.1-201ENST00000474387 401 ntBASIC1.77□□□□□ -2.13
SRP9P49458 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SRP9P49458 MRPS17P9-201ENST00000511924 393 ntBASIC1.77□□□□□ -2.13
SRP9P49458 RNU6-491P-201ENST00000516099 110 ntBASIC1.77□□□□□ -2.13
SRP9P49458 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP9P49458 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.77□□□□□ -2.13
SRP9P49458 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.77□□□□□ -2.13
SRP9P49458 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRP9P49458 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP9P49458 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP9P49458 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.77□□□□□ -2.13
SRP9P49458 AC068313.1-201ENST00000604028 1008 ntBASIC1.77□□□□□ -2.13
SRP9P49458 AC013412.1-201ENST00000610687 192 ntBASIC1.77□□□□□ -2.13
SRP9P49458 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SRP9P49458 AL356118.1-201ENST00000635272 1078 ntBASIC1.77□□□□□ -2.13
SRP9P49458 AC104454.1-201ENST00000421341 1401 ntBASIC1.76□□□□□ -2.13
SRP9P49458 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SRP9P49458 AC111188.2-201ENST00000529697 1387 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.76□□□□□ -2.13
SRP9P49458 AL451074.3-201ENST00000437709 472 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AL714022.1-201ENST00000439897 151 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.76□□□□□ -2.13
SRP9P49458 RNU7-23P-201ENST00000459465 62 ntBASIC1.76□□□□□ -2.13
SRP9P49458 KLF3P2-201ENST00000465138 268 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AC107626.1-201ENST00000471084 183 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AC116337.2-201ENST00000477662 156 ntBASIC1.76□□□□□ -2.13
SRP9P49458 MTCO2P9-201ENST00000503214 694 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AC022447.3-201ENST00000506865 495 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AC023141.11-201ENST00000508864 202 ntBASIC1.76□□□□□ -2.13
SRP9P49458 HMGB1P47-201ENST00000511281 589 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.76□□□□□ -2.13
SRP9P49458 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.76□□□□□ -2.13
SRP9P49458 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.76□□□□□ -2.13
SRP9P49458 SUMO2P14-201ENST00000604488 293 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AP004247.3-201ENST00000608682 624 ntBASIC1.76□□□□□ -2.13
SRP9P49458 AC110994.2-201ENST00000635481 492 ntBASIC1.76□□□□□ -2.13
SRP9P49458 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SRP9P49458 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SRP9P49458 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.75□□□□□ -2.13
SRP9P49458 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
SRP9P49458 MTND4P27-201ENST00000450813 1354 ntBASIC1.75□□□□□ -2.13
SRP9P49458 SNORA64-201ENST00000384674 134 ntBASIC1.75□□□□□ -2.13
SRP9P49458 MTND4LP20-201ENST00000402379 270 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AL136372.1-201ENST00000403060 228 ntBASIC1.75□□□□□ -2.13
SRP9P49458 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
SRP9P49458 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
SRP9P49458 RNA5SP270-201ENST00000411361 118 ntBASIC1.75□□□□□ -2.13
SRP9P49458 VTA1P1-201ENST00000414044 866 ntBASIC1.75□□□□□ -2.13
SRP9P49458 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
SRP9P49458 RPL27AP8-201ENST00000424277 446 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.75□□□□□ -2.13
SRP9P49458 FABP5P3-201ENST00000437960 408 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC004383.1-201ENST00000438135 289 ntBASIC1.75□□□□□ -2.13
SRP9P49458 UBE2V1P5-201ENST00000440070 405 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.75□□□□□ -2.13
SRP9P49458 AL589880.1-201ENST00000448271 287 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.75□□□□□ -2.13
SRP9P49458 RPL30P9-201ENST00000465586 330 ntBASIC1.75□□□□□ -2.13
SRP9P49458 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC022616.2-201ENST00000523185 300 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.75□□□□□ -2.13
SRP9P49458 AL049838.1-201ENST00000563647 981 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.75□□□□□ -2.13
SRP9P49458 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.75□□□□□ -2.13
SRP9P49458 AC025165.5-201ENST00000602802 578 ntBASIC1.75□□□□□ -2.13
SRP9P49458 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.75□□□□□ -2.13
SRP9P49458 CR589904.2-201ENST00000612533 440 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AL590099.1-201ENST00000615276 138 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC073968.1-201ENST00000618594 637 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC018926.3-201ENST00000618841 406 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AL353748.2-201ENST00000622148 471 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AC040168.1-201ENST00000623594 991 ntBASIC1.75□□□□□ -2.13
SRP9P49458 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SRP9P49458 RNU6-220P-201ENST00000390919 107 ntBASIC1.74□□□□□ -2.13
SRP9P49458 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SRP9P49458 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.74□□□□□ -2.13
SRP9P49458 XKRYP1-201ENST00000423438 492 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms