Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPL7L1P8-201ENST00000469911 741 ntBASIC3.57□□□□□ -1.84
SOX2P48431 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 EIF4EP3-201ENST00000498782 656 ntBASIC3.57□□□□□ -1.84
SOX2P48431 VN1R104P-201ENST00000505115 1009 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.57□□□□□ -1.84
SOX2P48431 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.57□□□□□ -1.84
SOX2P48431 SNORA31.20-201ENST00000517111 133 ntBASIC3.57□□□□□ -1.84
SOX2P48431 RNU6-840P-201ENST00000517275 65 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 SUB1P1-201ENST00000524415 382 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SOX2P48431 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.57□□□□□ -1.84
SOX2P48431 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.57□□□□□ -1.84
SOX2P48431 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
SOX2P48431 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 TVP23BP1-201ENST00000557500 617 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 AC010525.2-201ENST00000590920 195 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC006116.10-201ENST00000591836 581 ntBASIC3.57□□□□□ -1.84
SOX2P48431 SNRPGP15-201ENST00000600149 222 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC009994.1-201ENST00000606889 253 ntBASIC3.57□□□□□ -1.84
SOX2P48431 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SOX2P48431 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
SOX2P48431 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.57□□□□□ -1.84
SOX2P48431 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.57□□□□□ -1.84
SOX2P48431 uc_338.11-201ENST00000619132 160 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC025034.2-201ENST00000623264 286 ntBASIC3.57□□□□□ -1.84
SOX2P48431 AC004972.1-201ENST00000623934 2209 ntBASIC3.57□□□□□ -1.84
SOX2P48431 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.57□□□□□ -1.84
SOX2P48431 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX2P48431 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.57□□□□□ -1.84
SOX2P48431 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.57□□□□□ -1.84
SOX2P48431 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SOX2P48431 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SOX2P48431 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SOX2P48431 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 OR4G1P-203ENST00000641984 1631 ntBASIC3.56□□□□□ -1.84
SOX2P48431 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 RNU6-76P-201ENST00000384060 104 ntBASIC3.56□□□□□ -1.84
SOX2P48431 RNU6-1029P-201ENST00000384109 107 ntBASIC3.56□□□□□ -1.84
SOX2P48431 RNU1-89P-201ENST00000384592 164 ntBASIC3.56□□□□□ -1.84
SOX2P48431 RNU2-29P-201ENST00000410423 189 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC114491.1-201ENST00000416095 246 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX2P48431 AC093106.2-201ENST00000428212 385 ntBASIC3.56□□□□□ -1.84
SOX2P48431 RPL36AP53-201ENST00000432891 316 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX2P48431 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX2P48431 GAPDHP27-201ENST00000447427 1020 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX2P48431 RPL35AP28-201ENST00000459730 331 ntBASIC3.56□□□□□ -1.84
SOX2P48431 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.56□□□□□ -1.84
SOX2P48431 RPL39P36-201ENST00000490784 156 ntBASIC3.56□□□□□ -1.84
SOX2P48431 RPL29P14-201ENST00000495837 428 ntBASIC3.56□□□□□ -1.84
SOX2P48431 HMGN1P12-201ENST00000499125 195 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC091951.2-201ENST00000500762 203 ntBASIC3.56□□□□□ -1.84
SOX2P48431 MTCO2P30-201ENST00000503662 364 ntBASIC3.56□□□□□ -1.84
SOX2P48431 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX2P48431 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 AC026726.1-201ENST00000512859 601 ntBASIC3.56□□□□□ -1.84
SOX2P48431 RNU6-875P-201ENST00000516488 106 ntBASIC3.56□□□□□ -1.84
SOX2P48431 RN7SKP219-201ENST00000516825 296 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 AC008489.1-201ENST00000524271 483 ntBASIC3.56□□□□□ -1.84
SOX2P48431 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SOX2P48431 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.56□□□□□ -1.84
SOX2P48431 OR5D15P-201ENST00000531671 942 ntBASIC3.56□□□□□ -1.84
SOX2P48431 OR5B10P-201ENST00000532869 642 ntBASIC3.56□□□□□ -1.84
SOX2P48431 TRAV8-5-201ENST00000537369 341 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AP006289.1-201ENST00000538089 277 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC051619.2-201ENST00000559063 397 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AL360157.1-201ENST00000565962 87 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC012182.1-201ENST00000570133 895 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX2P48431 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.56□□□□□ -1.84
SOX2P48431 AC018638.8-201ENST00000588755 281 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC020914.4-201ENST00000597690 277 ntBASIC3.56□□□□□ -1.84
SOX2P48431 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX2P48431 AC023043.4-201ENST00000612081 449 ntBASIC3.56□□□□□ -1.84
SOX2P48431 FAM27D1-201ENST00000612308 341 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC004696.1-201ENST00000614345 607 ntBASIC3.56□□□□□ -1.84
SOX2P48431 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AL589994.2-201ENST00000621124 579 ntBASIC3.56□□□□□ -1.84
SOX2P48431 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX2P48431 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SOX2P48431 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX2P48431 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
SOX2P48431 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms