Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC6A4P31645 MTND5P3-201ENST00000438536 1800 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC6A4P31645 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC6A4P31645 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC6A4P31645 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SLC6A4P31645 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SLC6A4P31645 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC6A4P31645 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC6A4P31645 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC6A4P31645 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC004972.1-201ENST00000623934 2209 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC6A4P31645 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 RPL7P26-201ENST00000333817 754 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC6A4P31645 MIR554-201ENST00000384874 96 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC6A4P31645 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC6A4P31645 RNU4-78P-201ENST00000410940 126 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 RNA5SP104-201ENST00000410989 118 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC009161.1-201ENST00000417306 376 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC099677.1-201ENST00000420575 175 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC073415.1-201ENST00000449240 153 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC110792.1-201ENST00000491826 472 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC6A4P31645 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 RNU4-60P-201ENST00000517239 135 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 IFITM8P-201ENST00000522529 394 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC069240.1-201ENST00000548774 375 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AC007424.1-203ENST00000554613 687 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 NCAPGP2-201ENST00000557911 754 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC120057.2-201ENST00000571520 271 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 MIR4286-201ENST00000580651 93 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC6A4P31645 MIR3158-1-201ENST00000583596 81 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AC010680.3-201ENST00000604215 520 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AL158196.1-201ENST00000616786 434 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 AC006133.1-201ENST00000617106 264 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 AL136313.1-201ENST00000624804 202 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC6A4P31645 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
SLC6A4P31645 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC6A4P31645 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC6A4P31645 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SLC6A4P31645 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC6A4P31645 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SLC6A4P31645 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC6A4P31645 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SLC6A4P31645 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 AL356489.2-201ENST00000566968 3528 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 AL137003.2-201ENST00000606924 2538 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SLC6A4P31645 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RNU6-1249P-201ENST00000363237 111 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RNU6-1155P-201ENST00000363554 107 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 Y_RNA.166-201ENST00000363730 102 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RNA5SP399-201ENST00000364003 117 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RNU5E-6P-201ENST00000365574 115 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RNA5SP171-201ENST00000391071 115 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RN7SKP159-201ENST00000410657 292 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC6A4P31645 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC6A4P31645 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC6A4P31645 MTATP6P16-201ENST00000434543 526 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AL138799.3-201ENST00000438968 350 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 RPS29P7-201ENST00000439662 171 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC6A4P31645 AL162388.1-201ENST00000450912 352 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC6A4P31645 AC007967.1-201ENST00000455422 1159 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC6A4P31645 RPS15AP36-201ENST00000492022 382 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AC025554.1-201ENST00000505641 188 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC6A4P31645 SNORA67.7-201ENST00000516664 135 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.13□□□□□ -1.75
SLC6A4P31645 BNIP3P6-201ENST00000549284 499 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC6A4P31645 MIR4293-201ENST00000584305 78 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC6A4P31645 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC6A4P31645 AL606490.9-201ENST00000603331 271 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms