Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AL513043.1-201ENST00000439124 535 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 HMGB3P22-202ENST00000451823 572 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 GEMIN2P1-201ENST00000454246 752 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 RPL9P9-202ENST00000466501 579 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.57□□□□□ -1.68
VAMP1P23763 AC114801.2-201ENST00000503825 781 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 AC113367.2-201ENST00000505749 160 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 MTCYBP40-201ENST00000509390 1135 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.57□□□□□ -1.68
VAMP1P23763 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.57□□□□□ -1.68
VAMP1P23763 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.57□□□□□ -1.68
VAMP1P23763 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.57□□□□□ -1.68
VAMP1P23763 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.57□□□□□ -1.68
VAMP1P23763 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VAMP1P23763 AL139395.1-201ENST00000603662 160 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 CYP2C61P-201ENST00000604072 290 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 AL136131.3-201ENST00000607600 188 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.57□□□□□ -1.68
VAMP1P23763 AL591516.1-201ENST00000611326 274 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 U2.21-201ENST00000637295 81 ntBASIC4.57□□□□□ -1.68
VAMP1P23763 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAMP1P23763 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.57□□□□□ -1.68
VAMP1P23763 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VAMP1P23763 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
VAMP1P23763 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
VAMP1P23763 MTND4P27-201ENST00000450813 1354 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC109780.1-201ENST00000451768 1344 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.56□□□□□ -1.68
VAMP1P23763 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
VAMP1P23763 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 Y_RNA.187-201ENST00000363918 113 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 MIR521-1-201ENST00000384902 87 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 RNU6-1245P-201ENST00000411130 106 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 MRPL53P1-201ENST00000414323 319 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.56□□□□□ -1.68
VAMP1P23763 RPS29P20-201ENST00000489592 171 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC146944.2-203ENST00000502493 354 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC114324.2-202ENST00000503812 134 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC139495.1-202ENST00000513164 354 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC093303.1-201ENST00000514549 295 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 RNU6-1213P-201ENST00000517075 94 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.56□□□□□ -1.68
VAMP1P23763 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.56□□□□□ -1.68
VAMP1P23763 AC131935.1-201ENST00000524621 333 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 AC009643.1-201ENST00000532030 391 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.56□□□□□ -1.68
VAMP1P23763 AC103996.1-201ENST00000555468 102 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 MIR4776-2-201ENST00000580204 80 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 MIR4273-201ENST00000582824 84 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC020895.1-201ENST00000595362 272 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.56□□□□□ -1.68
VAMP1P23763 AC068768.2-201ENST00000602352 343 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 AC069307.1-201ENST00000602820 447 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 IMMP1LP3-201ENST00000604197 224 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.56□□□□□ -1.68
VAMP1P23763 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VAMP1P23763 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.56□□□□□ -1.68
VAMP1P23763 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 AC008725.1-201ENST00000605123 2263 ntBASIC4.56□□□□□ -1.68
VAMP1P23763 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VAMP1P23763 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VAMP1P23763 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VAMP1P23763 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VAMP1P23763 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.55□□□□□ -1.68
VAMP1P23763 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VAMP1P23763 RNU1-19P-201ENST00000363306 165 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 RNU6-270P-201ENST00000364131 105 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 MIR27A-201ENST00000385073 78 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VAMP1P23763 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VAMP1P23763 AL513475.1-201ENST00000406602 315 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 RNA5SP38-201ENST00000410750 119 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 RNA5SP31-201ENST00000411144 127 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.55□□□□□ -1.68
VAMP1P23763 RPL34P3-201ENST00000421454 338 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.55□□□□□ -1.68
VAMP1P23763 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.55□□□□□ -1.68
VAMP1P23763 USP9YP30-201ENST00000430729 455 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 DAP3P1-201ENST00000441522 278 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.55□□□□□ -1.68
VAMP1P23763 AC125238.1-201ENST00000448842 249 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.55□□□□□ -1.68
VAMP1P23763 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.55□□□□□ -1.68
VAMP1P23763 AC133134.1-201ENST00000466800 359 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 RN7SL583P-201ENST00000475692 287 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
VAMP1P23763 RPL7P42-201ENST00000481005 679 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 RPS27AP10-201ENST00000496103 208 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.55□□□□□ -1.68
VAMP1P23763 SCARNA20.4-201ENST00000516969 131 ntBASIC4.55□□□□□ -1.68
VAMP1P23763 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms