Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC011352.1-201ENST00000512300 793 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AC017037.2-201ENST00000513850 890 ntBASIC3.41□□□□□ -1.86
CDH1P12830 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CDH1P12830 DEFB108A-201ENST00000530110 222 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AC107954.1-201ENST00000565906 727 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AL356432.3-201ENST00000568952 465 ntBASIC3.41□□□□□ -1.86
CDH1P12830 NRBF2P1-201ENST00000587407 859 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AC006116.10-201ENST00000591836 581 ntBASIC3.41□□□□□ -1.86
CDH1P12830 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH1P12830 BX664608.1-201ENST00000610519 487 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AC002550.2-201ENST00000621246 394 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AC091953.2-201ENST00000623979 160 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AL034408.1-202ENST00000636088 415 ntBASIC3.41□□□□□ -1.86
CDH1P12830 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CDH1P12830 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH1P12830 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
CDH1P12830 AL133383.2-201ENST00000622958 2336 ntBASIC3.41□□□□□ -1.86
CDH1P12830 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH1P12830 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH1P12830 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CDH1P12830 AC011460.1-201ENST00000636268 1834 ntBASIC3.4□□□□□ -1.86
CDH1P12830 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.4□□□□□ -1.86
CDH1P12830 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
CDH1P12830 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH1P12830 RNU4-1-201ENST00000363925 141 ntBASIC3.4□□□□□ -1.87
CDH1P12830 SNORA73.2-201ENST00000364946 201 ntBASIC3.4□□□□□ -1.87
CDH1P12830 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH1P12830 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH1P12830 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH1P12830 AC092447.6-201ENST00000414578 210 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AC007390.1-201ENST00000415722 356 ntBASIC3.4□□□□□ -1.87
CDH1P12830 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH1P12830 EIF1P1-201ENST00000421436 341 ntBASIC3.4□□□□□ -1.87
CDH1P12830 GOT2P5-201ENST00000433995 546 ntBASIC3.4□□□□□ -1.87
CDH1P12830 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH1P12830 RPS4XP2-201ENST00000458402 793 ntBASIC3.4□□□□□ -1.87
CDH1P12830 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
CDH1P12830 RBM43P1-201ENST00000476891 1081 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AC092451.1-201ENST00000480211 153 ntBASIC3.4□□□□□ -1.87
CDH1P12830 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AC107934.1-201ENST00000522215 217 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH1P12830 AP000907.2-201ENST00000530827 353 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH1P12830 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH1P12830 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH1P12830 AL391840.1-201ENST00000571144 367 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH1P12830 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH1P12830 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH1P12830 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH1P12830 U4.5-201ENST00000617137 123 ntBASIC3.4□□□□□ -1.87
CDH1P12830 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH1P12830 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH1P12830 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH1P12830 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH1P12830 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH1P12830 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH1P12830 OR5J1P-201ENST00000313544 939 ntBASIC3.39□□□□□ -1.87
CDH1P12830 SNORA62.3-201ENST00000365110 153 ntBASIC3.39□□□□□ -1.87
CDH1P12830 RNU6-356P-201ENST00000384140 107 ntBASIC3.39□□□□□ -1.87
CDH1P12830 RNU6-114P-201ENST00000384704 105 ntBASIC3.39□□□□□ -1.87
CDH1P12830 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH1P12830 RPL23AP32-201ENST00000395315 459 ntBASIC3.39□□□□□ -1.87
CDH1P12830 RPL17P50-201ENST00000396131 546 ntBASIC3.39□□□□□ -1.87
CDH1P12830 GSTA9P-201ENST00000406231 611 ntBASIC3.39□□□□□ -1.87
CDH1P12830 RNU2-47P-201ENST00000410649 186 ntBASIC3.39□□□□□ -1.87
CDH1P12830 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH1P12830 MTND3P17-201ENST00000416968 344 ntBASIC3.39□□□□□ -1.87
CDH1P12830 AC068533.1-201ENST00000418542 415 ntBASIC3.39□□□□□ -1.87
CDH1P12830 PIGFP2-201ENST00000421400 651 ntBASIC3.39□□□□□ -1.87
CDH1P12830 MTCYBP5-201ENST00000423752 1135 ntBASIC3.39□□□□□ -1.87
CDH1P12830 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH1P12830 AC104850.1-201ENST00000435940 476 ntBASIC3.39□□□□□ -1.87
CDH1P12830 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH1P12830 UBE2V1P13-201ENST00000436983 439 ntBASIC3.39□□□□□ -1.87
CDH1P12830 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CDH1P12830 SNORD108-201ENST00000459332 71 ntBASIC3.39□□□□□ -1.87
CDH1P12830 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
CDH1P12830 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH1P12830 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH1P12830 AC109927.2-201ENST00000506416 303 ntBASIC3.39□□□□□ -1.87
CDH1P12830 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH1P12830 RN7SKP13-201ENST00000515933 244 ntBASIC3.39□□□□□ -1.87
CDH1P12830 RNU4-60P-201ENST00000517239 135 ntBASIC3.39□□□□□ -1.87
CDH1P12830 AC026403.1-201ENST00000518938 295 ntBASIC3.39□□□□□ -1.87
CDH1P12830 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH1P12830 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH1P12830 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH1P12830 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH1P12830 AC124947.2-202ENST00000552735 133 ntBASIC3.39□□□□□ -1.87
CDH1P12830 MIR4801-201ENST00000582704 82 ntBASIC3.39□□□□□ -1.87
CDH1P12830 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH1P12830 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH1P12830 LLPHP1-201ENST00000603571 367 ntBASIC3.39□□□□□ -1.87
CDH1P12830 AC121334.2-201ENST00000605387 271 ntBASIC3.39□□□□□ -1.87
CDH1P12830 XIST_intron.1-201ENST00000619444 68 ntBASIC3.39□□□□□ -1.87
CDH1P12830 AL357559.1-201ENST00000622228 274 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms