Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC009268.2-201ENST00000621925 457 ntBASIC3.79□□□□□ -1.8
CHRNB1P11230 AC091905.1-201ENST00000624400 311 ntBASIC3.79□□□□□ -1.8
CHRNB1P11230 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNB1P11230 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNB1P11230 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNB1P11230 AL365440.1-201ENST00000436135 2167 ntBASIC3.79□□□□□ -1.8
CHRNB1P11230 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNB1P11230 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNB1P11230 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNB1P11230 MFSD8-236ENST00000641509 4050 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNB1P11230 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNB1P11230 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNB1P11230 OR5J1P-201ENST00000313544 939 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 Y_RNA.1-201ENST00000352915 104 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 RNU6-780P-201ENST00000391030 104 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 RPL31P35-201ENST00000431058 377 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNB1P11230 SNORA71B-202ENST00000439232 272 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC108734.1-201ENST00000439549 399 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 RPS17P13-201ENST00000448974 407 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 RPL7P52-201ENST00000449200 742 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC104308.1-201ENST00000454621 333 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC008155.2-201ENST00000464337 397 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNB1P11230 RPS29P2-201ENST00000479278 136 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNB1P11230 RAC1P2-201ENST00000511164 579 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC010493.1-201ENST00000513479 292 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AP003497.1-201ENST00000528472 562 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AL157687.1-201ENST00000554853 619 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AL845331.3-202ENST00000562856 261 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AL356432.3-201ENST00000568952 465 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AC067852.4-201ENST00000590314 478 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AL391646.1-201ENST00000603860 190 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AL391813.2-201ENST00000609113 322 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AL591424.2-201ENST00000617023 128 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 AC079684.1-201ENST00000621405 437 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 AC091953.2-201ENST00000623979 160 ntBASIC3.78□□□□□ -1.8
CHRNB1P11230 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CHRNB1P11230 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNB1P11230 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNB1P11230 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNB1P11230 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CHRNB1P11230 USP8P1-201ENST00000494673 3183 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.77□□□□□ -1.81
CHRNB1P11230 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNB1P11230 RNU5E-1-201ENST00000362477 120 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 SNORD9-201ENST00000362566 104 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 RNU6-181P-201ENST00000363225 107 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 RNU5E-4P-201ENST00000364931 120 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 Y_RNA.303-201ENST00000364998 94 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 Y_RNA.402-201ENST00000383972 102 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 FGF7P8-201ENST00000402994 292 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 MRPL42P2-201ENST00000403169 426 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 RPL30P16-201ENST00000419341 429 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.77□□□□□ -1.81
CHRNB1P11230 DPPA2P1-201ENST00000428060 556 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC008065.1-201ENST00000428525 348 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.77□□□□□ -1.81
CHRNB1P11230 AC115115.1-201ENST00000449927 248 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AL353691.1-201ENST00000451332 387 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.77□□□□□ -1.81
CHRNB1P11230 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNB1P11230 RPL23AP62-201ENST00000463396 453 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 RPL37P6-202ENST00000464216 403 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC092989.1-201ENST00000481235 277 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 Vault.3-201ENST00000516676 95 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 RNU6-445P-201ENST00000516949 107 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC107934.1-201ENST00000522215 217 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AP003034.1-201ENST00000534621 422 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNB1P11230 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.77□□□□□ -1.81
CHRNB1P11230 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.77□□□□□ -1.81
CHRNB1P11230 AC008277.2-201ENST00000605196 797 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC121334.2-201ENST00000605387 271 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC079597.1-201ENST00000624306 508 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 AC099654.14-201ENST00000638599 341 ntBASIC3.77□□□□□ -1.81
CHRNB1P11230 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CHRNB1P11230 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CHRNB1P11230 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.77□□□□□ -1.81
CHRNB1P11230 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNB1P11230 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHRNB1P11230 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms