Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FAT1P1-201ENST00000406588 507 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 MTCO2P8-201ENST00000412213 658 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC104332.2-201ENST00000429959 156 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 ZYG11AP1-201ENST00000430329 837 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC092573.2-201ENST00000434546 243 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AL590664.1-201ENST00000448065 339 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC093392.2-201ENST00000450682 337 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 USP9YP25-201ENST00000457708 443 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 MEMO1P3-201ENST00000459811 302 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 RPL30P14-201ENST00000482744 348 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 VN1R104P-201ENST00000505115 1009 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC109445.1-201ENST00000512356 383 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC026801.2-201ENST00000515352 425 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 RNU6-798P-201ENST00000516912 103 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 LARP7P3-201ENST00000579888 337 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC009974.1-201ENST00000608881 455 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC245297.2-201ENST00000610119 565 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC090132.2-201ENST00000615881 347 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 MIR6076-201ENST00000617521 113 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC011330.2-201ENST00000621680 635 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC008443.7-201ENST00000622195 246 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HLA-DPB1P04440 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HLA-DPB1P04440 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 DEFB108F-201ENST00000344638 222 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 RNU4-92P-201ENST00000363783 136 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 RNU6-289P-201ENST00000364093 107 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 RNU6-76P-201ENST00000384060 104 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 RNU6-906P-201ENST00000384700 70 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 MTCYBP38-201ENST00000417160 1123 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 RPL27AP8-201ENST00000424277 446 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC107083.1-201ENST00000439643 279 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 FGF7P5-201ENST00000441829 291 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 PTENP1-201ENST00000447117 1215 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL592447.1-201ENST00000447592 540 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 snoU13.8-201ENST00000458890 104 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL049714.1-201ENST00000466686 347 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC006445.2-201ENST00000510061 472 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 RN7SKP132-201ENST00000516001 208 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC100870.1-201ENST00000522035 505 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 DEFB108D-201ENST00000527787 222 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AP003497.1-201ENST00000528472 562 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 EIF4BP1-201ENST00000554881 351 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC090695.1-201ENST00000561269 1222 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC009220.3-201ENST00000604318 586 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL033523.1-201ENST00000605153 153 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL158211.4-201ENST00000606988 584 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC004067.1-201ENST00000608733 700 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AL133445.2-201ENST00000611191 527 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AC099786.3-201ENST00000565735 1410 ntBASIC2.33□□□□□ -2.04
HLA-DPB1P04440 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DPB1P04440 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC106754.1-201ENST00000562632 1513 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AP000776.1-201ENST00000530032 1663 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms