Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU4-41P-201ENST00000364426 143 ntBASIC0.81□□□□□ -2.28
APOBP04114 RPS12P24-201ENST00000412619 387 ntBASIC0.81□□□□□ -2.28
APOBP04114 AC109780.2-201ENST00000413467 845 ntBASIC0.81□□□□□ -2.28
APOBP04114 RPL31P2-201ENST00000413849 377 ntBASIC0.81□□□□□ -2.28
APOBP04114 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.81□□□□□ -2.28
APOBP04114 UBE2V1P6-201ENST00000430840 422 ntBASIC0.81□□□□□ -2.28
APOBP04114 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
APOBP04114 SETP7-201ENST00000552169 453 ntBASIC0.81□□□□□ -2.28
APOBP04114 AC010928.2-201ENST00000588017 287 ntBASIC0.81□□□□□ -2.28
APOBP04114 AC004943.3-201ENST00000624116 600 ntBASIC0.81□□□□□ -2.28
APOBP04114 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
APOBP04114 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
APOBP04114 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.81□□□□□ -2.28
APOBP04114 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.81□□□□□ -2.28
APOBP04114 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
APOBP04114 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
APOBP04114 U8.1-201ENST00000362843 134 ntBASIC0.8□□□□□ -2.28
APOBP04114 RNU1-109P-201ENST00000383960 147 ntBASIC0.8□□□□□ -2.28
APOBP04114 Y_RNA.458-201ENST00000384240 102 ntBASIC0.8□□□□□ -2.28
APOBP04114 RPL26P37-201ENST00000411983 438 ntBASIC0.8□□□□□ -2.28
APOBP04114 ATG12P2-201ENST00000456830 416 ntBASIC0.8□□□□□ -2.28
APOBP04114 RNU6-1132P-201ENST00000459214 107 ntBASIC0.8□□□□□ -2.28
APOBP04114 AC108078.1-201ENST00000508073 725 ntBASIC0.8□□□□□ -2.28
APOBP04114 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.8□□□□□ -2.28
APOBP04114 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.8□□□□□ -2.28
APOBP04114 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.8□□□□□ -2.28
APOBP04114 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.8□□□□□ -2.28
APOBP04114 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.8□□□□□ -2.28
APOBP04114 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.8□□□□□ -2.28
APOBP04114 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC0.8□□□□□ -2.28
APOBP04114 RPS15AP7-201ENST00000439294 405 ntBASIC0.8□□□□□ -2.28
APOBP04114 MIR3935-201ENST00000583472 104 ntBASIC0.8□□□□□ -2.28
APOBP04114 AL449363.1-201ENST00000617815 186 ntBASIC0.8□□□□□ -2.28
APOBP04114 AL161722.3-201ENST00000605789 2983 ntBASIC0.8□□□□□ -2.28
APOBP04114 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.8□□□□□ -2.28
APOBP04114 AC009965.2-201ENST00000425328 970 ntBASIC0.8□□□□□ -2.28
APOBP04114 AL583843.1-201ENST00000456070 346 ntBASIC0.8□□□□□ -2.28
APOBP04114 AC098657.3-201ENST00000620434 263 ntBASIC0.8□□□□□ -2.28
APOBP04114 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
APOBP04114 PABPC1P9-201ENST00000426076 1612 ntBASIC0.8□□□□□ -2.28
APOBP04114 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
APOBP04114 Y_RNA.115-201ENST00000363272 98 ntBASIC0.79□□□□□ -2.28
APOBP04114 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.79□□□□□ -2.28
APOBP04114 RNU6-1320P-201ENST00000390838 107 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNU6-1269P-201ENST00000391139 107 ntBASIC0.79□□□□□ -2.28
APOBP04114 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.79□□□□□ -2.28
APOBP04114 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.79□□□□□ -2.28
APOBP04114 AC008850.1-201ENST00000427546 362 ntBASIC0.79□□□□□ -2.28
APOBP04114 FABP5P3-201ENST00000437960 408 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNU6-599P-201ENST00000459383 107 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNU6-1193P-201ENST00000459461 107 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNA5SP309-201ENST00000516670 106 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.79□□□□□ -2.28
APOBP04114 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.79□□□□□ -2.28
APOBP04114 RNU6-84P-201ENST00000607737 102 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNU6-368P-201ENST00000620928 107 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNU6-538P-201ENST00000622329 107 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC048347.1-201ENST00000624621 427 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.79□□□□□ -2.28
APOBP04114 PTP4A1P1-201ENST00000420539 515 ntBASIC0.79□□□□□ -2.28
APOBP04114 EZH2P1-201ENST00000431167 291 ntBASIC0.79□□□□□ -2.28
APOBP04114 SNORA31.23-201ENST00000517219 133 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC090617.7-201ENST00000623952 126 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNU6-146P-201ENST00000384602 108 ntBASIC0.79□□□□□ -2.28
APOBP04114 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.79□□□□□ -2.28
APOBP04114 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.79□□□□□ -2.28
APOBP04114 AC092451.1-201ENST00000480211 153 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNA5SP121-201ENST00000516537 101 ntBASIC0.79□□□□□ -2.28
APOBP04114 CD24P2-201ENST00000565486 219 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC073413.2-201ENST00000604332 360 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC090525.3-201ENST00000605601 189 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC091932.3-201ENST00000624223 323 ntBASIC0.79□□□□□ -2.28
APOBP04114 AP001486.2-201ENST00000561652 5113 ntBASIC0.79□□□□□ -2.28
APOBP04114 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.79□□□□□ -2.28
APOBP04114 RBBP8P1-201ENST00000449447 1844 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC011155.1-201ENST00000316512 456 ntBASIC0.79□□□□□ -2.28
APOBP04114 RNU1-78P-201ENST00000391248 165 ntBASIC0.79□□□□□ -2.28
APOBP04114 RN7SKP51-201ENST00000410781 304 ntBASIC0.79□□□□□ -2.28
APOBP04114 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.79□□□□□ -2.28
APOBP04114 RPS3AP44-201ENST00000425466 790 ntBASIC0.79□□□□□ -2.28
APOBP04114 BMI1P1-201ENST00000445879 941 ntBASIC0.79□□□□□ -2.28
APOBP04114 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.79□□□□□ -2.28
APOBP04114 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.79□□□□□ -2.28
APOBP04114 CBX3P2-202ENST00000583365 535 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC005498.1-201ENST00000592125 465 ntBASIC0.79□□□□□ -2.28
APOBP04114 AC022513.1-201ENST00000624512 117 ntBASIC0.79□□□□□ -2.28
APOBP04114 AP000560.1-201ENST00000624150 1937 ntBASIC0.78□□□□□ -2.28
APOBP04114 RNU1-148P-201ENST00000384472 162 ntBASIC0.78□□□□□ -2.28
APOBP04114 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.78□□□□□ -2.28
APOBP04114 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
APOBP04114 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC0.78□□□□□ -2.28
APOBP04114 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
APOBP04114 AL136164.4-201ENST00000625013 2135 ntBASIC0.78□□□□□ -2.28
APOBP04114 Y_RNA.258-201ENST00000364613 105 ntBASIC0.78□□□□□ -2.28
APOBP04114 RPL7P27-201ENST00000403775 720 ntBASIC0.78□□□□□ -2.28
APOBP04114 CYCSP48-201ENST00000417124 323 ntBASIC0.78□□□□□ -2.28
APOBP04114 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.78□□□□□ -2.28
APOBP04114 AC090515.1-201ENST00000465295 476 ntBASIC0.78□□□□□ -2.28
APOBP04114 AC105313.1-201ENST00000509121 353 ntBASIC0.78□□□□□ -2.28
APOBP04114 Y_RNA.675-201ENST00000516389 149 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms