Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTCO3P24-201ENST00000572729 782 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 MIR5694-201ENST00000581190 76 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC098657.3-201ENST00000620434 263 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTA1P02549 HMGB1P13-201ENST00000406019 642 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 MTND2P2-201ENST00000434633 945 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 ARPC3P2-201ENST00000457786 533 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SPTA1P02549 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.26□□□□□ -2.21
SPTA1P02549 SUB1P4-201ENST00000566062 339 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 AC000123.2-201ENST00000623124 461 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTA1P02549 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SPTA1P02549 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 OR51B8P-201ENST00000449892 769 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTA1P02549 AC093281.2-201ENST00000510153 597 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 DUXAP5-201ENST00000529668 529 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 AL590099.1-201ENST00000615276 138 ntBASIC1.26□□□□□ -2.21
SPTA1P02549 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTA1P02549 AC011155.1-201ENST00000316512 456 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 RNU2-37P-201ENST00000410695 177 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AL445183.3-201ENST00000414168 502 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.25□□□□□ -2.21
SPTA1P02549 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.25□□□□□ -2.21
SPTA1P02549 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTA1P02549 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTA1P02549 CKS1BP5-201ENST00000434172 273 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTA1P02549 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTA1P02549 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTA1P02549 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.25□□□□□ -2.21
SPTA1P02549 AC090515.1-201ENST00000465295 476 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AC022447.3-201ENST00000506865 495 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AC104115.2-201ENST00000523026 687 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.25□□□□□ -2.21
SPTA1P02549 IMMP1LP2-201ENST00000552954 492 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.25□□□□□ -2.21
SPTA1P02549 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTA1P02549 MIR6086-201ENST00000638065 55 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SPTA1P02549 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
SPTA1P02549 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SPTA1P02549 HMGB1P5-201ENST00000255320 642 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 CST2P1-201ENST00000425770 87 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SPTA1P02549 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.25□□□□□ -2.21
SPTA1P02549 HMGB3P10-201ENST00000434734 572 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 OR10R1P-201ENST00000441524 1141 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.25□□□□□ -2.21
SPTA1P02549 AC239860.2-201ENST00000525886 270 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 AC009541.1-201ENST00000438279 2662 ntBASIC1.25□□□□□ -2.21
SPTA1P02549 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SPTA1P02549 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
SPTA1P02549 SNORD56.5-201ENST00000364281 72 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 SSXP9-201ENST00000417503 292 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 FTH1P12-201ENST00000432137 551 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 Z85994.2-201ENST00000434327 452 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.24□□□□□ -2.21
SPTA1P02549 RNA5SP330-201ENST00000517096 96 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.24□□□□□ -2.21
SPTA1P02549 HSPE1P4-201ENST00000550617 308 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 MIR4716-201ENST00000579628 84 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
SPTA1P02549 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
SPTA1P02549 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.24□□□□□ -2.21
SPTA1P02549 MIR144-201ENST00000384886 86 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 RNU6-1320P-201ENST00000390838 107 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 RNU6-1269P-201ENST00000391139 107 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 AC018630.2-202ENST00000422992 927 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 UBE2V2P1-201ENST00000434717 398 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.24□□□□□ -2.21
SPTA1P02549 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.24□□□□□ -2.21
SPTA1P02549 RNU6-599P-201ENST00000459383 107 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 snoU13.3-201ENST00000459441 104 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 RNU6-1193P-201ENST00000459461 107 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 AC092451.1-201ENST00000480211 153 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.24□□□□□ -2.21
SPTA1P02549 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.24□□□□□ -2.21
SPTA1P02549 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 AC068446.3-201ENST00000555285 382 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.24□□□□□ -2.21
SPTA1P02549 AC083899.3-201ENST00000603413 594 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 AC083806.3-201ENST00000614016 455 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 RNU6-368P-201ENST00000620928 107 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 RNU6-538P-201ENST00000622329 107 ntBASIC1.24□□□□□ -2.21
SPTA1P02549 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SPTA1P02549 AL030996.1-201ENST00000411430 235 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.23□□□□□ -2.21
SPTA1P02549 HAUS1P1-201ENST00000505275 832 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 MTCYBP37-201ENST00000510642 1133 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.23□□□□□ -2.21
SPTA1P02549 ACTR3BP3-201ENST00000565577 979 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AC104307.1-201ENST00000616142 196 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AL355596.1-201ENST00000565399 3996 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.23□□□□□ -2.21
SPTA1P02549 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.23□□□□□ -2.21
SPTA1P02549 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.23□□□□□ -2.21
SPTA1P02549 AC098583.1-201ENST00000480875 255 ntBASIC1.23□□□□□ -2.21
SPTA1P02549 AC092989.1-201ENST00000481235 277 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms