Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TOMM40O96008 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.4□□□□□ -1.86
TOMM40O96008 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.86
TOMM40O96008 MTND4P14-201ENST00000435799 1354 ntBASIC3.4□□□□□ -1.86
TOMM40O96008 MTCO1P9-201ENST00000505577 1534 ntBASIC3.4□□□□□ -1.86
TOMM40O96008 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.4□□□□□ -1.86
TOMM40O96008 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 SNORD6-201ENST00000365444 73 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 Y_RNA.414-201ENST00000384011 101 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 Y_RNA.530-201ENST00000384587 101 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 MIR659-201ENST00000384963 97 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TOMM40O96008 Y_RNA.579-201ENST00000390939 94 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 UBE2V1P2-201ENST00000397758 440 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 MIR548P-201ENST00000408336 84 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 RNA5SP107-201ENST00000411358 122 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 RNU6-516P-201ENST00000411381 104 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 ARL5AP1-201ENST00000418991 388 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 MTCO2P27-201ENST00000420740 428 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC008065.1-201ENST00000428525 348 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 PSMA2P3-201ENST00000429685 675 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AL359265.2-201ENST00000434367 631 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 LYPLA1P1-201ENST00000434514 622 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 PTMAP6-201ENST00000439110 327 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 HMGB3P11-201ENST00000440127 604 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 PRPS1P1-201ENST00000445305 876 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AL118520.1-201ENST00000450770 291 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 Y_RNA.635-201ENST00000459041 101 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 RNU7-180P-201ENST00000459240 63 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 MTCO1P29-201ENST00000496868 288 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC008638.1-201ENST00000506035 866 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.4□□□□□ -1.87
TOMM40O96008 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 RNU6-1170P-201ENST00000515974 106 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 RNU6-1038P-201ENST00000516516 104 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 RNU6-273P-201ENST00000516937 96 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.4□□□□□ -1.87
TOMM40O96008 AL118558.2-201ENST00000556294 238 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 FRG2DP-202ENST00000566967 323 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.4□□□□□ -1.87
TOMM40O96008 MIR5583-1-201ENST00000580941 59 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.4□□□□□ -1.87
TOMM40O96008 RN7SL690P-201ENST00000582087 240 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC069061.3-201ENST00000582254 823 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.4□□□□□ -1.87
TOMM40O96008 AL390240.1-201ENST00000612950 384 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 uc_338.15-201ENST00000615470 191 ntBASIC3.4□□□□□ -1.87
TOMM40O96008 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
TOMM40O96008 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
TOMM40O96008 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.4□□□□□ -1.87
TOMM40O96008 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
TOMM40O96008 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TOMM40O96008 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOMM40O96008 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOMM40O96008 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TOMM40O96008 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOMM40O96008 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.39□□□□□ -1.87
TOMM40O96008 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOMM40O96008 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
TOMM40O96008 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOMM40O96008 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.39□□□□□ -1.87
TOMM40O96008 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TOMM40O96008 RNA5SP388-201ENST00000362584 119 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 RNU6-188P-201ENST00000364207 107 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.39□□□□□ -1.87
TOMM40O96008 RNU6-1013P-201ENST00000384180 107 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 Y_RNA.493-201ENST00000384422 102 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 MT-TC-201ENST00000387405 66 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 MIR3065-201ENST00000390137 79 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 RNU11-4P-201ENST00000391149 133 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 AL592114.1-201ENST00000403842 483 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 RN7SKP159-201ENST00000410657 292 ntBASIC3.39□□□□□ -1.87
TOMM40O96008 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.39□□□□□ -1.87
TOMM40O96008 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms