Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.65□□□□□ -1.99
CLDN9O95484 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN9O95484 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.65□□□□□ -1.99
CLDN9O95484 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN9O95484 AC124947.2-202ENST00000552735 133 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 SETP2-201ENST00000553886 926 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AL355836.1-201ENST00000555951 870 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN9O95484 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN9O95484 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN9O95484 AC131235.4-201ENST00000609288 620 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AC107294.1-201ENST00000609524 467 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AC073308.1-201ENST00000623696 305 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 AL159972.1-201ENST00000625150 448 ntBASIC2.65□□□□□ -1.99
CLDN9O95484 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN9O95484 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN9O95484 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN9O95484 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN9O95484 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.64□□□□□ -1.99
CLDN9O95484 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CLDN9O95484 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN9O95484 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN9O95484 RNU5E-8P-201ENST00000363502 116 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 RNU6-270P-201ENST00000364131 105 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN9O95484 SPA17P1-201ENST00000416656 452 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 HMGN2P30-201ENST00000423237 256 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.64□□□□□ -1.99
CLDN9O95484 AC008850.1-201ENST00000427546 362 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN9O95484 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN9O95484 MTND5P14-201ENST00000441481 1267 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CLDN9O95484 ZNF886P-201ENST00000450781 723 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN9O95484 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN9O95484 AL049829.1-201ENST00000465411 156 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 S100A11P2-201ENST00000467589 312 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.64□□□□□ -1.99
CLDN9O95484 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.64□□□□□ -1.99
CLDN9O95484 SCARNA15.2-201ENST00000516409 127 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CLDN9O95484 COX6CP8-201ENST00000522620 226 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN9O95484 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN9O95484 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN9O95484 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN9O95484 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.64□□□□□ -1.99
CLDN9O95484 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.64□□□□□ -1.99
CLDN9O95484 AC090888.1-201ENST00000561335 1141 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN9O95484 AMZ2P1-203ENST00000565833 850 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 LARP7P3-201ENST00000579888 337 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 OR4K7P-201ENST00000580232 945 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.64□□□□□ -1.99
CLDN9O95484 AL033523.1-201ENST00000605153 153 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AL158050.2-201ENST00000605336 568 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AC093732.2-201ENST00000607950 274 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AL603758.1-201ENST00000618654 241 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 AC002064.3-201ENST00000623448 346 ntBASIC2.64□□□□□ -1.99
CLDN9O95484 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN9O95484 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN9O95484 AL161781.1-201ENST00000354277 403 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 RNU6-1078P-201ENST00000364522 103 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 SNORD21-201ENST00000383953 95 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 SNORA18.3-201ENST00000384122 132 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 RNU6-1207P-201ENST00000384343 107 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 MIR1284-201ENST00000408337 120 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLDN9O95484 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.63□□□□□ -1.99
CLDN9O95484 ARPC3P1-201ENST00000437218 533 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN9O95484 EEF1A1P39-201ENST00000440791 250 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 MRPL50P4-201ENST00000446432 475 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 NANOGNBP1-201ENST00000448444 480 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 SNORD121B-201ENST00000458838 81 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 RPL9P33-201ENST00000484311 566 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC011825.1-201ENST00000484967 388 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC096576.1-201ENST00000489014 359 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN9O95484 HIGD1AP13-201ENST00000509878 289 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 RNU6-840P-201ENST00000517275 65 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC021451.1-201ENST00000523498 1129 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN9O95484 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN9O95484 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN9O95484 HMGB1P6-201ENST00000569046 646 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC068135.2-201ENST00000569293 1028 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN9O95484 AC008739.2-201ENST00000597006 317 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC068313.1-201ENST00000604028 1008 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AL121652.1-201ENST00000608851 448 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC004696.1-201ENST00000614345 607 ntBASIC2.63□□□□□ -1.99
CLDN9O95484 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN9O95484 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLDN9O95484 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN9O95484 AC116618.1-201ENST00000634617 774 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms