Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MRPL50P4-201ENST00000446432 475 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN1O15353 NF1P3-201ENST00000457709 450 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AC015724.1-201ENST00000478577 156 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AC006390.1-201ENST00000508068 283 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AC093809.1-201ENST00000509155 340 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN1O15353 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN1O15353 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN1O15353 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN1O15353 CKS1BP3-201ENST00000600888 237 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AC007687.1-201ENST00000602704 304 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AC106900.2-201ENST00000604994 317 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN1O15353 AL603758.1-201ENST00000618654 241 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 MIR4727-201ENST00000622232 55 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AC138305.3-201ENST00000624988 240 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN1O15353 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
FOXN1O15353 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN1O15353 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
FOXN1O15353 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN1O15353 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN1O15353 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN1O15353 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FOXN1O15353 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN1O15353 NMD3P1-201ENST00000439704 1488 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
FOXN1O15353 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN1O15353 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN1O15353 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN1O15353 RNU6-254P-201ENST00000363377 107 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 Y_RNA.159-201ENST00000363674 87 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 RNU6-777P-201ENST00000364265 104 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 RNU6-1322P-201ENST00000364309 107 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 RNU6-359P-201ENST00000365466 108 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN1O15353 SNORA48.8-201ENST00000391324 134 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.45□□□□□ -1.7
FOXN1O15353 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN1O15353 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN1O15353 AC048351.1-201ENST00000420064 602 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXN1O15353 MTCO2P5-201ENST00000422621 426 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC133104.1-201ENST00000429100 218 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AL365400.1-201ENST00000431854 640 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC023347.2-201ENST00000433994 462 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC024082.2-201ENST00000434771 238 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 MTCO1P27-201ENST00000448269 226 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 RPS17P13-201ENST00000448974 407 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AL591623.2-201ENST00000449978 222 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 TRGVB-201ENST00000453257 471 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN1O15353 SNORD105B-201ENST00000458770 79 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 RPL23AP12-201ENST00000467573 473 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC069499.1-201ENST00000489433 509 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC005912.1-201ENST00000495392 255 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN1O15353 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN1O15353 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN1O15353 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN1O15353 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN1O15353 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN1O15353 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXN1O15353 AL033523.1-201ENST00000605153 153 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 BCRP9-201ENST00000605312 388 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.45□□□□□ -1.7
FOXN1O15353 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN1O15353 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
FOXN1O15353 UBE3AP2-201ENST00000429033 2259 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AL365440.1-201ENST00000436135 2167 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 DBF4P1-201ENST00000412976 1892 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 Y_RNA.216-201ENST00000364205 93 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 U3.19-201ENST00000390893 196 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 SNORD115.1-201ENST00000391109 76 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 RPL5P18-201ENST00000406671 891 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN1O15353 CYCSP4-201ENST00000429682 331 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC005019.1-201ENST00000436455 431 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC083863.1-201ENST00000438811 231 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN1O15353 AC025750.2-201ENST00000442609 450 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 RPL17P49-201ENST00000443728 411 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC097493.1-201ENST00000463958 372 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN1O15353 RPL23AP71-201ENST00000470966 469 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC023194.1-201ENST00000493084 308 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC097462.2-201ENST00000504623 481 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN1O15353 AC110792.2-201ENST00000510278 224 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 PHBP14-201ENST00000512887 367 ntBASIC4.44□□□□□ -1.7
FOXN1O15353 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.44□□□□□ -1.7
FOXN1O15353 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN1O15353 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN1O15353 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.44□□□□□ -1.7
FOXN1O15353 AC093012.1-202ENST00000549403 582 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms