Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNA5SP56-201ENST00000410277 118 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGN4O00479 AC007098.1-201ENST00000420122 367 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 PGBD4P6-201ENST00000421501 610 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGN4O00479 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.36□□□□□ -2.19
HMGN4O00479 TPTE2P6-202ENST00000445572 1007 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 BUD31P2-201ENST00000449374 300 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGN4O00479 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 snoU13.26-201ENST00000459452 105 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.36□□□□□ -2.19
HMGN4O00479 RN7SL429P-201ENST00000479090 223 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 RN7SL489P-201ENST00000486185 223 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 RN7SL327P-201ENST00000488659 223 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 NDUFB4P2-201ENST00000509515 391 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AC108120.2-201ENST00000512973 294 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 DEFB122-202ENST00000569013 197 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGN4O00479 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 UBE2L4-201ENST00000587688 464 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 ZNF92P3-201ENST00000596594 954 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AC008749.1-201ENST00000597650 306 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGN4O00479 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGN4O00479 RN7SL853P-201ENST00000617250 223 ntBASIC1.36□□□□□ -2.19
HMGN4O00479 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.36□□□□□ -2.19
HMGN4O00479 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
HMGN4O00479 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGN4O00479 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HMGN4O00479 RNU4-13P-201ENST00000364019 141 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HMGN4O00479 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGN4O00479 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGN4O00479 TMEM167AP1-201ENST00000423409 219 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AL513185.2-201ENST00000425543 193 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGN4O00479 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGN4O00479 AL359385.1-201ENST00000456509 365 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AC104689.1-201ENST00000473356 768 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGN4O00479 RPS27P26-201ENST00000494583 239 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGN4O00479 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGN4O00479 RN7SKP31-201ENST00000516354 278 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGN4O00479 CASP1P1-201ENST00000526345 212 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 GLYCAM1-201ENST00000546596 285 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AC027807.1-201ENST00000559921 996 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGN4O00479 SNORD14A-201ENST00000606526 91 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 AC005332.10-201ENST00000612725 619 ntBASIC1.35□□□□□ -2.19
HMGN4O00479 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.35□□□□□ -2.19
HMGN4O00479 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMGN4O00479 MTND4P27-201ENST00000450813 1354 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HMGN4O00479 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
HMGN4O00479 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.34□□□□□ -2.19
HMGN4O00479 SDAD1P2-201ENST00000441308 2028 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 RNU6-1243P-201ENST00000364028 107 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 SNORA68.1-201ENST00000364537 132 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 SNORA16B-201ENST00000364674 135 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 RNU6-76P-201ENST00000384060 104 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 MIR17-201ENST00000385012 84 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.34□□□□□ -2.19
HMGN4O00479 RNU4-78P-201ENST00000410940 126 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGN4O00479 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.34□□□□□ -2.19
HMGN4O00479 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.34□□□□□ -2.19
HMGN4O00479 AC009414.1-201ENST00000427200 443 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMGN4O00479 AL034418.1-201ENST00000448675 860 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.34□□□□□ -2.19
HMGN4O00479 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.34□□□□□ -2.19
HMGN4O00479 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGN4O00479 AC021146.7-201ENST00000509604 775 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC109464.2-201ENST00000510242 943 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC108157.1-201ENST00000510511 539 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGN4O00479 AC083923.1-201ENST00000523708 376 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AP004607.1-201ENST00000524456 203 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGN4O00479 AC118942.1-201ENST00000529674 1035 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.34□□□□□ -2.19
HMGN4O00479 AC067805.1-201ENST00000559344 470 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC023824.2-201ENST00000566185 400 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AL158827.2-201ENST00000602494 330 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AP001330.4-201ENST00000604350 154 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC106900.2-201ENST00000604994 317 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC025016.1-201ENST00000616746 682 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC108479.2-201ENST00000617314 601 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 U6.48-201ENST00000618523 106 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AC097372.4-201ENST00000625025 466 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 AL691447.3-201ENST00000635020 330 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms