Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC018692.3-201ENST00000623929 123 ntBASIC3.34□□□□□ -1.87
O00370 AC026422.1-201ENST00000623961 452 ntBASIC3.34□□□□□ -1.87
O00370 MIR3974-201ENST00000637126 96 ntBASIC3.34□□□□□ -1.87
O00370 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.34□□□□□ -1.88
O00370 AC073346.2-201ENST00000624724 2058 ntBASIC3.34□□□□□ -1.88
O00370 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
O00370 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
O00370 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
O00370 FRG1BP-201ENST00000278882 761 ntBASIC3.33□□□□□ -1.88
O00370 AL672167.1-206ENST00000356293 943 ntBASIC3.33□□□□□ -1.88
O00370 RNU6-525P-201ENST00000363685 104 ntBASIC3.33□□□□□ -1.88
O00370 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.33□□□□□ -1.88
O00370 SNORA46-201ENST00000384762 135 ntBASIC3.33□□□□□ -1.88
O00370 MTCYBP36-201ENST00000404146 440 ntBASIC3.33□□□□□ -1.88
O00370 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.33□□□□□ -1.88
O00370 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.33□□□□□ -1.88
O00370 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.33□□□□□ -1.88
O00370 MTCO1P39-201ENST00000426148 480 ntBASIC3.33□□□□□ -1.88
O00370 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.33□□□□□ -1.88
O00370 OR2B8P-201ENST00000432841 938 ntBASIC3.33□□□□□ -1.88
O00370 AC108734.1-201ENST00000439549 399 ntBASIC3.33□□□□□ -1.88
O00370 TRIM60P18-201ENST00000441518 828 ntBASIC3.33□□□□□ -1.88
O00370 AP000542.1-201ENST00000448473 371 ntBASIC3.33□□□□□ -1.88
O00370 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.33□□□□□ -1.88
O00370 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.33□□□□□ -1.88
O00370 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.33□□□□□ -1.88
O00370 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.33□□□□□ -1.88
O00370 AC093534.1-201ENST00000504977 132 ntBASIC3.33□□□□□ -1.88
O00370 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.33□□□□□ -1.88
O00370 AF131216.2-201ENST00000512316 564 ntBASIC3.33□□□□□ -1.88
O00370 RNU6-1095P-201ENST00000516148 108 ntBASIC3.33□□□□□ -1.88
O00370 RNU6-714P-201ENST00000516963 103 ntBASIC3.33□□□□□ -1.88
O00370 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.33□□□□□ -1.88
O00370 AP004247.1-201ENST00000531556 1289 ntBASIC3.33□□□□□ -1.88
O00370 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.33□□□□□ -1.88
O00370 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.33□□□□□ -1.88
O00370 AC136618.2-201ENST00000575091 400 ntBASIC3.33□□□□□ -1.88
O00370 OR4K8P-201ENST00000578842 1048 ntBASIC3.33□□□□□ -1.88
O00370 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.33□□□□□ -1.88
O00370 MIR544B-201ENST00000582372 78 ntBASIC3.33□□□□□ -1.88
O00370 AP001004.1-201ENST00000582468 324 ntBASIC3.33□□□□□ -1.88
O00370 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.33□□□□□ -1.88
O00370 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.33□□□□□ -1.88
O00370 PRELID3BP8-201ENST00000604148 295 ntBASIC3.33□□□□□ -1.88
O00370 PABPC1P9-201ENST00000426076 1612 ntBASIC3.33□□□□□ -1.88
O00370 AC110774.1-201ENST00000623567 2018 ntBASIC3.32□□□□□ -1.88
O00370 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
O00370 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
O00370 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
O00370 OR1S2-201ENST00000302592 978 ntBASIC3.32□□□□□ -1.88
O00370 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
O00370 MIR483-201ENST00000385070 76 ntBASIC3.32□□□□□ -1.88
O00370 MIR493-201ENST00000385254 89 ntBASIC3.32□□□□□ -1.88
O00370 U3.42-201ENST00000408746 214 ntBASIC3.32□□□□□ -1.88
O00370 RPL7P8-201ENST00000411964 730 ntBASIC3.32□□□□□ -1.88
O00370 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.32□□□□□ -1.88
O00370 BMS1P22-201ENST00000414726 313 ntBASIC3.32□□□□□ -1.88
O00370 RPL23AP39-201ENST00000415533 405 ntBASIC3.32□□□□□ -1.88
O00370 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.32□□□□□ -1.88
O00370 AL353678.1-201ENST00000422735 741 ntBASIC3.32□□□□□ -1.88
O00370 MED14P1-201ENST00000430517 648 ntBASIC3.32□□□□□ -1.88
O00370 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.32□□□□□ -1.88
O00370 MTND1P30-201ENST00000441241 901 ntBASIC3.32□□□□□ -1.88
O00370 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
O00370 AC093392.2-201ENST00000450682 337 ntBASIC3.32□□□□□ -1.88
O00370 AL353691.1-201ENST00000451332 387 ntBASIC3.32□□□□□ -1.88
O00370 KATNBL1P6-201ENST00000453433 915 ntBASIC3.32□□□□□ -1.88
O00370 AC234775.1-201ENST00000454247 670 ntBASIC3.32□□□□□ -1.88
O00370 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.32□□□□□ -1.88
O00370 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.32□□□□□ -1.88
O00370 AC104472.2-201ENST00000469035 601 ntBASIC3.32□□□□□ -1.88
O00370 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
O00370 RPL30P14-201ENST00000482744 348 ntBASIC3.32□□□□□ -1.88
O00370 AC026427.2-201ENST00000506228 536 ntBASIC3.32□□□□□ -1.88
O00370 RNA5SP385-201ENST00000515947 110 ntBASIC3.32□□□□□ -1.88
O00370 SNORA31.1-201ENST00000515993 133 ntBASIC3.32□□□□□ -1.88
O00370 SNORA31.5-201ENST00000516190 133 ntBASIC3.32□□□□□ -1.88
O00370 SNORA74D-201ENST00000516404 141 ntBASIC3.32□□□□□ -1.88
O00370 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.32□□□□□ -1.88
O00370 OR4H12P-201ENST00000556269 907 ntBASIC3.32□□□□□ -1.88
O00370 MED28P6-201ENST00000558776 231 ntBASIC3.32□□□□□ -1.88
O00370 AC135628.1-201ENST00000568867 534 ntBASIC3.32□□□□□ -1.88
O00370 AC034268.2-201ENST00000571784 482 ntBASIC3.32□□□□□ -1.88
O00370 UBL5P2-201ENST00000583788 219 ntBASIC3.32□□□□□ -1.88
O00370 WISP1-OT1-201ENST00000602893 642 ntBASIC3.32□□□□□ -1.88
O00370 OR2AS2P-201ENST00000606902 342 ntBASIC3.32□□□□□ -1.88
O00370 AC009570.1-201ENST00000609599 745 ntBASIC3.32□□□□□ -1.88
O00370 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
O00370 AL442067.2-201ENST00000614033 363 ntBASIC3.32□□□□□ -1.88
O00370 AL596245.1-201ENST00000618994 362 ntBASIC3.32□□□□□ -1.88
O00370 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.32□□□□□ -1.88
O00370 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.32□□□□□ -1.88
O00370 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.32□□□□□ -1.88
O00370 AL445523.1-201ENST00000451184 1362 ntBASIC3.32□□□□□ -1.88
O00370 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.32□□□□□ -1.88
O00370 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.32□□□□□ -1.88
O00370 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.32□□□□□ -1.88
O00370 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.32□□□□□ -1.88
O00370 CUL1P1-201ENST00000509510 2425 ntBASIC3.32□□□□□ -1.88
O00370 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms