Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 METTL5-202ENST00000308099 629 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 RNA5SP374-201ENST00000362939 125 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 SNORA70.4-201ENST00000365509 134 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-748P-201ENST00000384648 107 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 TAF9BP2-201ENST00000400856 499 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 SNORA11.5-201ENST00000408163 128 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 SDAD1P3-201ENST00000427380 333 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 MTND4LP10-201ENST00000435146 291 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 TAAR7P-201ENST00000436141 242 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 Z99127.2-201ENST00000441426 334 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC009237.8-201ENST00000445492 379 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC104073.1-201ENST00000451988 151 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 PRSS3P4-201ENST00000453323 162 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC005410.1-202ENST00000460347 485 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC114786.4-201ENST00000508771 728 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AL359273.1-201ENST00000510918 627 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC114797.1-201ENST00000514003 728 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 SETP12-201ENST00000514068 805 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-1282P-201ENST00000516735 96 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 RNA5SP165-201ENST00000517142 115 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 UBTFL10-201ENST00000528532 562 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 ARL2BPP2-201ENST00000550907 489 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC011611.5-201ENST00000552477 578 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 MEG8-218ENST00000556720 456 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC027176.1-201ENST00000560204 514 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR6862-1-201ENST00000613016 70 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC104763.3-201ENST00000613765 618 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR6862-2-201ENST00000614755 70 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 AC130650.2-201ENST00000618736 2403 ntBASIC0.96□□□□□ -2.26
CHKB-CPT1BH3BT56 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 DEFB108F-201ENST00000344638 222 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU1-72P-201ENST00000362976 153 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 RNA5SP267-201ENST00000364893 126 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR34A-201ENST00000385130 110 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 FABP12P1-201ENST00000401911 322 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL033519.2-201ENST00000403958 392 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL356131.1-201ENST00000405826 414 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR1290-201ENST00000408735 78 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU4-74P-201ENST00000411280 161 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC019097.1-201ENST00000424783 735 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC118469.1-201ENST00000442943 488 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 CEACAMP10-202ENST00000495431 496 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC114801.2-201ENST00000503825 781 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC098862.1-201ENST00000504991 413 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC008526.1-201ENST00000509149 338 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC117525.1-201ENST00000515228 503 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-488P-201ENST00000515918 99 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 SNORD116-30-201ENST00000516468 85 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 RNA5SP281-201ENST00000516504 135 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 DEFB108D-201ENST00000527787 222 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AP005435.4-201ENST00000529514 284 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL391261.3-201ENST00000557194 520 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC012435.1-202ENST00000568772 240 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC090312.2-201ENST00000582687 378 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms