Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC091544.4-201ENST00000555268 342 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC234778.2-201ENST00000566241 354 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC245036.5-201ENST00000596330 847 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 Z99289.3-201ENST00000605586 594 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 HMGN2P28-201ENST00000606102 262 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC063944.3-201ENST00000609969 533 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC109809.1-201ENST00000619665 545 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC009318.4-201ENST00000620496 486 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP002791.1-201ENST00000623291 381 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC243829.7-201ENST00000633081 225 ntBASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
TMX2-CTNND1H3BSU7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TMX2-CTNND1H3BSU7 AP000526.1-201ENST00000603308 1388 ntBASIC2.59□□□□□ -2
TMX2-CTNND1H3BSU7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
TMX2-CTNND1H3BSU7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TMX2-CTNND1H3BSU7 CDR1-202ENST00000625883 1485 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RNU6-374P-201ENST00000364146 108 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 U3.12-201ENST00000364498 214 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 SNORA70B-201ENST00000384210 135 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 U3.29-201ENST00000391296 212 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RPL21P75-201ENST00000396599 483 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RPL21P28-201ENST00000401418 483 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL139039.1-201ENST00000401900 692 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL592114.1-201ENST00000403842 483 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL139095.1-201ENST00000404326 391 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL024474.1-201ENST00000404655 591 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL592148.1-201ENST00000413568 445 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 HMGB1P49-201ENST00000418882 569 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 CKS1BP5-201ENST00000434172 273 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 VN1R10P-201ENST00000447106 875 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 MTCYBP11-201ENST00000447254 1109 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RPL39P6-201ENST00000448289 150 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RPL21P39-201ENST00000463605 483 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC092757.1-201ENST00000467293 467 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 HMGB1P25-201ENST00000468402 607 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC010301.1-201ENST00000473936 355 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RPL21P93-201ENST00000480465 489 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC233702.1-201ENST00000482905 502 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC087190.1-201ENST00000484462 480 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC093591.1-201ENST00000491435 481 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 OR4G11P-201ENST00000492842 939 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RPL21P16-201ENST00000495531 483 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RNU5A-4P-201ENST00000516588 111 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL355836.1-201ENST00000555951 870 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 OR4K7P-201ENST00000580232 945 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC113368.1-201ENST00000603736 382 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC025588.3-201ENST00000604182 274 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC093424.1-201ENST00000604999 338 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AL137847.3-201ENST00000611521 109 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AP000484.1-201ENST00000620067 1252 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC025034.2-201ENST00000623264 286 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 CTSLP2-204ENST00000629029 392 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 AC116618.1-201ENST00000634617 774 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 U6.101-201ENST00000637707 76 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 ZNF37BP-203ENST00000452306 1352 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 MTCO1P23-201ENST00000415223 1526 ntBASIC2.58□□□□□ -2
TMX2-CTNND1H3BSU7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 RPL23AP29-201ENST00000397284 453 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 RNU6-757P-201ENST00000410334 100 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AL096701.2-201ENST00000416920 238 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC006548.1-201ENST00000427470 102 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 PSMA2P3-201ENST00000429685 675 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC008481.1-201ENST00000463278 396 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC133134.1-201ENST00000466800 359 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 MTND5P4-201ENST00000514978 288 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms