Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 HMGB3P15-201ENST00000507326 574 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 MTND4LP22-201ENST00000508209 276 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 KLHL2P1-201ENST00000508691 521 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC091826.1-201ENST00000514065 313 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC135628.1-201ENST00000568867 534 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC034268.2-201ENST00000571784 482 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC005951.1-201ENST00000576706 485 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 MIR544B-201ENST00000582372 78 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC015871.2-201ENST00000603605 948 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 BCRP9-201ENST00000605312 388 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC007998.5-201ENST00000622938 237 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 PCMTD1P7-201ENST00000634506 357 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 CRYM-AS1-204ENST00000637983 556 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC099063.3-201ENST00000642066 185 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AC092447.10-201ENST00000620607 1652 ntBASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
NEDD8-MDP1E9PL57 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
NEDD8-MDP1E9PL57 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC116096.1-201ENST00000566804 2314 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 FRG1BP-201ENST00000278882 761 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 Y_RNA.18-201ENST00000362461 102 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-660P-201ENST00000364566 109 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU5A-2P-201ENST00000384337 116 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-882P-201ENST00000391025 103 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AF228730.1-201ENST00000397972 663 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AL356421.1-201ENST00000403255 413 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 SNORA11.2-201ENST00000408318 127 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU4-72P-201ENST00000410754 173 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 SSXP9-201ENST00000417503 292 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 MTATP6P17-201ENST00000431030 672 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RPS6P15-201ENST00000431996 751 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC009969.1-201ENST00000438726 172 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 MTND1P26-201ENST00000440488 538 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL37P4-201ENST00000448908 268 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 PAXBP1P1-201ENST00000449315 447 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU7-125P-201ENST00000458760 62 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL21P8-201ENST00000465083 535 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 UBE2DNL-203ENST00000474922 222 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC010486.2-201ENST00000505572 483 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-678P-201ENST00000516832 109 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-528P-201ENST00000516926 100 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 GTF3AP2-201ENST00000557014 266 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 FAM60BP-201ENST00000578364 658 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC011260.1-201ENST00000578420 472 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC090616.2-202ENST00000584248 222 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC013444.2-201ENST00000603317 787 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AL022099.1-201ENST00000604551 712 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC079248.2-201ENST00000623779 326 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AL136164.4-201ENST00000625013 2135 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 MTND5P7-201ENST00000413558 1798 ntBASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD8-MDP1E9PL57 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 OR5J1P-201ENST00000313544 939 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 SNORA9.2-201ENST00000365361 133 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 Y_RNA.500-201ENST00000384466 111 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-851P-201ENST00000384565 107 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL136372.1-201ENST00000403060 228 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 MIR1305-201ENST00000408300 86 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU2-71P-201ENST00000411395 189 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms