Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CNOT1A5YKK6 RNU6-492P-201ENST00000363035 104 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 Y_RNA.294-201ENST00000364916 102 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 RNU1-139P-201ENST00000391307 165 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 RPL31P52-201ENST00000407532 367 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 HMGN1P14-201ENST00000412459 517 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.43□□□□□ -2.18
CNOT1A5YKK6 RPS29P20-201ENST00000489592 171 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.43□□□□□ -2.18
CNOT1A5YKK6 AP000907.2-201ENST00000530827 353 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CNOT1A5YKK6 AC098679.5-201ENST00000624394 571 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 AL121594.5-201ENST00000631724 573 ntBASIC1.43□□□□□ -2.18
CNOT1A5YKK6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 RNU6-799P-201ENST00000363567 107 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AC092638.1-201ENST00000411966 1275 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 RPS3AP44-201ENST00000425466 790 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AC073901.1-201ENST00000462471 408 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AC022790.1-201ENST00000522872 204 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AP001029.3-201ENST00000588063 596 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 RNA5SP108-201ENST00000605921 117 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 MIR6788-201ENST00000618842 66 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AC240504.1-201ENST00000395709 845 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 RPL23AP47-201ENST00000408017 460 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AL139109.1-201ENST00000455491 297 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AC010627.1-201ENST00000503819 1294 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 MTCYBP37-201ENST00000510642 1133 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 MTND5P4-201ENST00000514978 288 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 SNORA31.11-201ENST00000516528 139 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 AC084364.2-201ENST00000546924 395 ntBASIC1.42□□□□□ -2.18
CNOT1A5YKK6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.42□□□□□ -2.18
CNOT1A5YKK6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 WARS2P1-201ENST00000429678 537 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 EZH2P1-201ENST00000431167 291 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 HMGB1P12-201ENST00000438594 598 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 HMGN2P13-201ENST00000476476 274 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 MTCYBP18-201ENST00000501056 747 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 SETP7-201ENST00000552169 453 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 AC068944.2-201ENST00000610373 403 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 AC004241.3-201ENST00000611728 517 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 AC022079.2-201ENST00000619739 566 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 SSXP9-201ENST00000417503 292 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 THAP5P1-201ENST00000439089 262 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 AL353898.1-201ENST00000444055 238 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
CNOT1A5YKK6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CNOT1A5YKK6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CNOT1A5YKK6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.4□□□□□ -2.18
CNOT1A5YKK6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.4□□□□□ -2.18
CNOT1A5YKK6 RNA5SP27-201ENST00000363839 119 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 RPS12P24-201ENST00000412619 387 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AL445687.1-201ENST00000439946 251 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 RNU6-347P-201ENST00000516658 105 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC012493.3-201ENST00000604494 112 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 FABP5P3-201ENST00000437960 408 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 HMGN2P18-201ENST00000450680 270 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC069277.2-201ENST00000454211 432 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC090515.1-201ENST00000465295 476 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AL163153.1-201ENST00000554223 283 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 TRAV28-201ENST00000557548 323 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 BNIP3P4-201ENST00000604946 565 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC090425.2-201ENST00000608818 501 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AL109933.3-201ENST00000619095 188 ntBASIC1.4□□□□□ -2.19
CNOT1A5YKK6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.4□□□□□ -2.19
CNOT1A5YKK6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CNOT1A5YKK6 RNU1-133P-201ENST00000364867 167 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 U3.40-201ENST00000408706 208 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 RNA5SP492-201ENST00000411330 114 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.39□□□□□ -2.19
CNOT1A5YKK6 RNU6-1218P-201ENST00000458990 108 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.39□□□□□ -2.19
CNOT1A5YKK6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.39□□□□□ -2.19
CNOT1A5YKK6 DNAJC8P1-201ENST00000554535 372 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.39□□□□□ -2.19
CNOT1A5YKK6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CNOT1A5YKK6 AC012321.1-201ENST00000561622 1588 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms