Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 SCARNA20.6-201ENST00000517251 106 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AC093012.1-202ENST00000549403 582 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 MIR3611-201ENST00000584484 83 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 DUXAP4-201ENST00000603046 613 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AP000254.1-201ENST00000609934 520 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AC004696.1-201ENST00000614345 607 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AC138932.5-201ENST00000617759 563 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AC092628.2-201ENST00000622492 339 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 PISRT1-201ENST00000626175 531 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 AC110994.2-201ENST00000635481 492 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 FARSBP1-201ENST00000435808 1778 ntBASIC2.97□□□□□ -1.93
TRBV5-5A0A0J9YX44 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RPL7P26-201ENST00000333817 754 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RNU6-1284P-201ENST00000363701 100 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 U3.11-201ENST00000364476 212 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RNU4-24P-201ENST00000364565 139 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 SNORA75-201ENST00000384158 137 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 U8.11-201ENST00000384699 133 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 U8.12-201ENST00000384701 133 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RNU6-248P-201ENST00000410720 107 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 UBE2D3P2-201ENST00000424409 445 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC137499.1-201ENST00000427602 88 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL590383.1-201ENST00000428602 75 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC073614.1-201ENST00000438690 650 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 USP9YP15-201ENST00000442391 422 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC016696.1-201ENST00000446949 318 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 GAPDHP17-201ENST00000449858 1001 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 U8.18-201ENST00000459285 133 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RNU7-170P-201ENST00000459303 61 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 MTCO2P29-201ENST00000465212 189 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC079140.3-201ENST00000511111 550 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RNU1-143P-201ENST00000516296 146 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 SCARNA15.2-201ENST00000516409 127 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 SNORA18.6-201ENST00000516792 115 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC011979.2-201ENST00000527568 352 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AP002963.1-201ENST00000530590 184 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC005951.2-201ENST00000576282 495 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 MIR3186-201ENST00000577404 85 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 MIR4286-201ENST00000580651 93 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 MIR4293-201ENST00000584305 78 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 NRBF2P1-201ENST00000587407 859 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC090578.1-201ENST00000604955 591 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC109347.2-201ENST00000610220 349 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 U1.23-201ENST00000610293 146 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC011939.3-201ENST00000613686 466 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 RNU1-68P-201ENST00000615382 146 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC006338.2-201ENST00000616864 791 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC009509.4-201ENST00000619202 509 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 U1.39-201ENST00000621562 146 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC066616.2-201ENST00000559334 1481 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 AL356274.2-201ENST00000624379 3752 ntBASIC2.96□□□□□ -1.94
TRBV5-5A0A0J9YX44 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TRBV5-5A0A0J9YX44 AC106871.1-201ENST00000568324 3102 ntBASIC2.95□□□□□ -1.94
TRBV5-5A0A0J9YX44 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.95□□□□□ -1.94
TRBV5-5A0A0J9YX44 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRBV5-5A0A0J9YX44 SRP72P2-201ENST00000344851 1979 ntBASIC2.95□□□□□ -1.94
TRBV5-5A0A0J9YX44 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRBV5-5A0A0J9YX44 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms