Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU1-52P-201ENST00000384190 164 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 RNU4-52P-201ENST00000384209 138 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 SNORA67.3-201ENST00000384366 140 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 U3.20-201ENST00000390909 217 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AL358075.3-201ENST00000426289 226 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 MTND4LP14-201ENST00000429447 288 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AL356320.1-201ENST00000429616 163 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 IFNA11P-201ENST00000446352 526 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 MTCO3P11-201ENST00000455103 774 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC104164.3-201ENST00000467363 1258 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 TRBV12-1-201ENST00000479785 344 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 NDUFB4P2-201ENST00000509515 391 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC008413.1-201ENST00000511864 177 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 IGKV3-31-201ENST00000523109 329 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 SETP7-201ENST00000552169 453 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 TRAV28-201ENST00000557548 323 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC026464.5-201ENST00000562497 722 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 MIR3616-201ENST00000584070 92 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC097504.2-201ENST00000608088 454 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AP005137.2-201ENST00000609238 400 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC245884.12-201ENST00000615364 59 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AL163051.2-201ENST00000618976 735 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 UCA1.1-201ENST00000620952 75 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AL356266.1-201ENST00000623311 483 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 AC064859.1-201ENST00000624741 174 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 MFSD8-213ENST00000641134 1327 ntBASIC1.63□□□□□ -2.15
TRAV3A0A0B4J244 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RN7SKP226-201ENST00000364912 300 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RNA5SP126-201ENST00000365092 109 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SNORA70B-201ENST00000384210 135 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RNU6-1035P-201ENST00000384477 107 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RNU6-1005P-201ENST00000384519 107 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SNORA64-201ENST00000384674 134 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 MIR16-1-201ENST00000385271 89 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RNA5SP354-201ENST00000391247 136 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 U3.40-201ENST00000408706 208 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 MIR1290-201ENST00000408735 78 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RN7SKP32-201ENST00000410167 303 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RNA5SP425-201ENST00000410336 112 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RNU4-72P-201ENST00000410754 173 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AL513331.1-201ENST00000411908 397 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 ARPC3P1-201ENST00000437218 533 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 snoU13.28-201ENST00000459235 104 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AC128713.1-201ENST00000471495 306 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RN7SL429P-201ENST00000479090 223 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AC108734.3-201ENST00000481241 1165 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RN7SL489P-201ENST00000486185 223 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 FAM172BP-201ENST00000487497 1089 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RN7SL327P-201ENST00000488659 223 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AL359273.1-201ENST00000510918 627 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RNU6-1282P-201ENST00000516735 96 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AC090888.1-201ENST00000561335 1141 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SULT1C2P1-202ENST00000562418 459 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 MIR5089-201ENST00000580047 84 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AC105224.1-201ENST00000587055 421 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RPS15AP11-201ENST00000594193 385 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AC120053.1-201ENST00000607706 736 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 RN7SL853P-201ENST00000617250 223 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AP003399.1-201ENST00000637534 361 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 SGO1P1-201ENST00000603525 1447 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 GDI2P1-201ENST00000429312 1336 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 MTND4P1-201ENST00000457501 1466 ntBASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV3A0A0B4J244 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV3A0A0B4J244 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms