Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 Z85996.1-201ENST00000494644 937 ntBASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 NUDT16P1-203ENST00000513809 620 ntBASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PPARGC1AQ9UBK2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 LINC01465-201ENST00000408887 1940 ntBASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 SNORA78-201ENST00000459373 127 ntBASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PPARGC1AQ9UBK2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 AC116562.2-201ENST00000507042 360 ntBASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 MIR4785-201ENST00000585005 73 ntBASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 AC026471.5-201ENST00000615068 467 ntBASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 Z82202.1-201ENST00000623446 1880 ntBASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.87■□□□□ 0.77
PPARGC1AQ9UBK2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 TSPY7P-201ENST00000431358 1114 ntBASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms