Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 AC126763.1-201ENST00000552015 2118 ntBASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 PNMA6B-201ENST00000538162 1200 ntBASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 AL121832.2-201ENST00000610979 668 ntBASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC52A3Q9NQ40 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 TSPY21P-201ENST00000433481 731 ntBASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 TSPY23P-201ENST00000440136 739 ntBASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC52A3Q9NQ40 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC52A3Q9NQ40 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC52A3Q9NQ40 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC52A3Q9NQ40 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
SLC52A3Q9NQ40 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SLC52A3Q9NQ40 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 AC060766.5-201ENST00000590539 871 ntBASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms