Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 RPS2P4-201ENST00000476944 856 ntBASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 AL031963.3-201ENST00000606441 850 ntBASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TIMMDC1Q9NPL8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 MIR718-201ENST00000390190 70 ntBASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 AL023875.1-201ENST00000640777 796 ntBASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 PRORSD1P-202ENST00000563365 2154 ntBASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.34■□□□□ 0.53
TIMMDC1Q9NPL8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TIMMDC1Q9NPL8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 AC008550.1-201ENST00000511500 884 ntBASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 AL121829.2-201ENST00000620908 328 ntBASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TIMMDC1Q9NPL8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMMDC1Q9NPL8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMMDC1Q9NPL8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms