Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 AC023511.2-201ENST00000618803 211 ntBASIC19.17■□□□□ 0.66
CHRDQ9H2X0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.17■□□□□ 0.66
CHRDQ9H2X0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDQ9H2X0 AL162377.1-201ENST00000618844 1793 ntBASIC19.16■□□□□ 0.66
CHRDQ9H2X0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 HLA-F-220ENST00000434407 884 ntBASIC19.16■□□□□ 0.66
CHRDQ9H2X0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 EMBP1-201ENST00000458200 901 ntBASIC19.16■□□□□ 0.66
CHRDQ9H2X0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 AL031008.1-201ENST00000619963 541 ntBASIC19.16■□□□□ 0.66
CHRDQ9H2X0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDQ9H2X0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 AC036111.1-201ENST00000533973 1582 ntBASIC19.15■□□□□ 0.66
CHRDQ9H2X0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 AC104692.2-201ENST00000603054 253 ntBASIC19.15■□□□□ 0.66
CHRDQ9H2X0 AL732292.2-201ENST00000609649 430 ntBASIC19.15■□□□□ 0.66
CHRDQ9H2X0 AC079602.3-201ENST00000623931 403 ntBASIC19.15■□□□□ 0.66
CHRDQ9H2X0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 KRT18P1-202ENST00000452408 1331 ntBASIC19.15■□□□□ 0.66
CHRDQ9H2X0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.15■□□□□ 0.66
CHRDQ9H2X0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDQ9H2X0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRDQ9H2X0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 AL022342.1-201ENST00000400363 863 ntBASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 DRAXINP1-201ENST00000437611 948 ntBASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDQ9H2X0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms