Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 AC111152.3-201ENST00000569699 673 ntBASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.23■■□□□ 1.31
RTFDC1Q9BY42 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 AL023284.2-201ENST00000405850 579 ntBASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 HLA-F-220ENST00000434407 884 ntBASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 AC079602.3-201ENST00000623931 403 ntBASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RTFDC1Q9BY42 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 LINC01006-201ENST00000333319 2292 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 AL157384.1-201ENST00000445995 2473 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 AL845331.1-201ENST00000424978 1190 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 NUS1P1-201ENST00000446295 882 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 FAAHP1-202ENST00000446499 1238 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 SEC1P-202ENST00000473944 940 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 ZNF815P-204ENST00000434898 1737 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 TCF3P1-201ENST00000423021 1937 ntBASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTFDC1Q9BY42 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 AL162741.1-201ENST00000565563 1558 ntBASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 AC004870.1-201ENST00000315132 882 ntBASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 KRT8P26-201ENST00000534154 1276 ntBASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RTFDC1Q9BY42 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 AC093525.10-201ENST00000625130 1569 ntBASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTFDC1Q9BY42 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms