Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 AL359736.2-201ENST00000621992 437 ntBASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.03■□□□□ 0.48
TUBA1CQ9BQE3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 AL354751.1-201ENST00000412768 1863 ntBASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 RPPH1-201ENST00000516869 333 ntBASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 AC023632.3-201ENST00000521633 145 ntBASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 AC009237.14-201ENST00000609975 1594 ntBASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TUBA1CQ9BQE3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.02■□□□□ 0.47
TUBA1CQ9BQE3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TUBA1CQ9BQE3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TUBA1CQ9BQE3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TUBA1CQ9BQE3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TUBA1CQ9BQE3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.02■□□□□ 0.47
TUBA1CQ9BQE3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.02■□□□□ 0.47
TUBA1CQ9BQE3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TUBA1CQ9BQE3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 FAM197Y4-202ENST00000622692 608 ntBASIC18■□□□□ 0.47
TUBA1CQ9BQE3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 AP006294.2-201ENST00000641667 209 ntBASIC18■□□□□ 0.47
TUBA1CQ9BQE3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 AC068880.1-201ENST00000507289 2297 ntBASIC18■□□□□ 0.47
TUBA1CQ9BQE3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18■□□□□ 0.47
TUBA1CQ9BQE3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TUBA1CQ9BQE3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.99■□□□□ 0.47
TUBA1CQ9BQE3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TUBA1CQ9BQE3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms