Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE4Q96A23 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPNE4Q96A23 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 AC096733.2-201ENST00000609937 1394 ntBASIC17.15■□□□□ 0.34
CPNE4Q96A23 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE4Q96A23 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE4Q96A23 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 MMP23A-201ENST00000234610 1017 ntBASIC17.15■□□□□ 0.34
CPNE4Q96A23 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.15■□□□□ 0.34
CPNE4Q96A23 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE4Q96A23 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE4Q96A23 FITM1-202ENST00000559294 800 ntBASIC17.15■□□□□ 0.34
CPNE4Q96A23 SLC25A1P4-201ENST00000567977 778 ntBASIC17.15■□□□□ 0.34
CPNE4Q96A23 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE4Q96A23 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CPNE4Q96A23 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE4Q96A23 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 MIR1238-201ENST00000408483 83 ntBASIC17.14■□□□□ 0.33
CPNE4Q96A23 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 TSPY15P-201ENST00000457163 923 ntBASIC17.14■□□□□ 0.33
CPNE4Q96A23 AC008040.2-201ENST00000461049 708 ntBASIC17.14■□□□□ 0.33
CPNE4Q96A23 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CPNE4Q96A23 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE4Q96A23 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE4Q96A23 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE4Q96A23 CRYGFP-201ENST00000418459 633 ntBASIC17.13■□□□□ 0.33
CPNE4Q96A23 MFAP1P1-201ENST00000442257 1255 ntBASIC17.13■□□□□ 0.33
CPNE4Q96A23 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE4Q96A23 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE4Q96A23 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE4Q96A23 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE4Q96A23 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE4Q96A23 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE4Q96A23 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE4Q96A23 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE4Q96A23 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms