Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP9XQ93008 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP9XQ93008 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP9XQ93008 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP9XQ93008 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.66■□□□□ 0.26
USP9XQ93008 IGHV3-47-201ENST00000425060 335 ntBASIC16.66■□□□□ 0.26
USP9XQ93008 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.66■□□□□ 0.26
USP9XQ93008 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.66■□□□□ 0.26
USP9XQ93008 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.66■□□□□ 0.26
USP9XQ93008 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.66■□□□□ 0.26
USP9XQ93008 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP9XQ93008 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP9XQ93008 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP9XQ93008 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 AC018712.1-201ENST00000455767 687 ntBASIC16.65■□□□□ 0.26
USP9XQ93008 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.65■□□□□ 0.26
USP9XQ93008 AL136038.4-201ENST00000603606 1261 ntBASIC16.65■□□□□ 0.26
USP9XQ93008 AC233723.2-201ENST00000623798 2106 ntBASIC16.65■□□□□ 0.26
USP9XQ93008 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP9XQ93008 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
USP9XQ93008 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
USP9XQ93008 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP9XQ93008 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP9XQ93008 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 AF186996.4-201ENST00000467186 377 ntBASIC16.65■□□□□ 0.26
USP9XQ93008 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.65■□□□□ 0.26
USP9XQ93008 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USP9XQ93008 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.65■□□□□ 0.26
USP9XQ93008 AC010327.4-202ENST00000591484 748 ntBASIC16.65■□□□□ 0.26
USP9XQ93008 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.65■□□□□ 0.26
USP9XQ93008 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
USP9XQ93008 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
USP9XQ93008 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
USP9XQ93008 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.64■□□□□ 0.25
USP9XQ93008 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.64■□□□□ 0.25
USP9XQ93008 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.64■□□□□ 0.25
USP9XQ93008 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.64■□□□□ 0.25
USP9XQ93008 AP005901.3-202ENST00000581653 237 ntBASIC16.64■□□□□ 0.25
USP9XQ93008 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
USP9XQ93008 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.64■□□□□ 0.25
USP9XQ93008 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.64■□□□□ 0.25
USP9XQ93008 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
USP9XQ93008 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.64■□□□□ 0.25
USP9XQ93008 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
USP9XQ93008 Z69720.1-201ENST00000601483 472 ntBASIC16.64■□□□□ 0.25
USP9XQ93008 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.64■□□□□ 0.25
USP9XQ93008 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.64■□□□□ 0.25
USP9XQ93008 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.64■□□□□ 0.25
USP9XQ93008 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USP9XQ93008 FBXW4P1-201ENST00000426721 2239 ntBASIC16.64■□□□□ 0.25
USP9XQ93008 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
USP9XQ93008 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.63■□□□□ 0.25
USP9XQ93008 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.63■□□□□ 0.25
USP9XQ93008 AC073648.2-201ENST00000510116 352 ntBASIC16.63■□□□□ 0.25
USP9XQ93008 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.63■□□□□ 0.25
USP9XQ93008 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.63■□□□□ 0.25
USP9XQ93008 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
USP9XQ93008 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.63■□□□□ 0.25
USP9XQ93008 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USP9XQ93008 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms