Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AC104417.2-201ENST00000562989 1793 ntBASIC21.64■■□□□ 1.06
USP6NLQ92738 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6NLQ92738 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6NLQ92738 PVRIG2P-201ENST00000435460 978 ntBASIC21.64■■□□□ 1.05
USP6NLQ92738 KRT17P6-201ENST00000453795 1220 ntBASIC21.64■■□□□ 1.05
USP6NLQ92738 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP6NLQ92738 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.64■■□□□ 1.05
USP6NLQ92738 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.64■■□□□ 1.05
USP6NLQ92738 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.64■■□□□ 1.05
USP6NLQ92738 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USP6NLQ92738 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USP6NLQ92738 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP6NLQ92738 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP6NLQ92738 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6NLQ92738 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6NLQ92738 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.63■■□□□ 1.05
USP6NLQ92738 AL845331.1-201ENST00000424978 1190 ntBASIC21.63■■□□□ 1.05
USP6NLQ92738 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.63■■□□□ 1.05
USP6NLQ92738 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP6NLQ92738 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 AL121672.3-201ENST00000608644 468 ntBASIC21.63■■□□□ 1.05
USP6NLQ92738 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
USP6NLQ92738 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USP6NLQ92738 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
USP6NLQ92738 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USP6NLQ92738 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6NLQ92738 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6NLQ92738 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6NLQ92738 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6NLQ92738 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.62■■□□□ 1.05
USP6NLQ92738 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6NLQ92738 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6NLQ92738 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.62■■□□□ 1.05
USP6NLQ92738 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.62■■□□□ 1.05
USP6NLQ92738 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.62■■□□□ 1.05
USP6NLQ92738 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USP6NLQ92738 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
USP6NLQ92738 GPAT2P1-201ENST00000444924 1672 ntBASIC21.62■■□□□ 1.05
USP6NLQ92738 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USP6NLQ92738 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
USP6NLQ92738 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
USP6NLQ92738 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
USP6NLQ92738 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
USP6NLQ92738 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.61■■□□□ 1.05
USP6NLQ92738 BX276092.5-203ENST00000456199 560 ntBASIC21.61■■□□□ 1.05
USP6NLQ92738 AC111152.3-201ENST00000569699 673 ntBASIC21.61■■□□□ 1.05
USP6NLQ92738 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.61■■□□□ 1.05
USP6NLQ92738 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.61■■□□□ 1.05
USP6NLQ92738 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.61■■□□□ 1.05
USP6NLQ92738 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
USP6NLQ92738 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 AP005212.1-201ENST00000581547 1997 ntBASIC21.61■■□□□ 1.05
USP6NLQ92738 PKD1P6-201ENST00000343738 4769 ntBASIC21.61■■□□□ 1.05
USP6NLQ92738 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
USP6NLQ92738 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USP6NLQ92738 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
USP6NLQ92738 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
USP6NLQ92738 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.6■■□□□ 1.05
USP6NLQ92738 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
USP6NLQ92738 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 AP000347.1-202ENST00000435868 847 ntBASIC21.6■■□□□ 1.05
USP6NLQ92738 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.6■■□□□ 1.05
USP6NLQ92738 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
USP6NLQ92738 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
USP6NLQ92738 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.6■■□□□ 1.05
USP6NLQ92738 AC024243.1-201ENST00000609234 778 ntBASIC21.6■■□□□ 1.05
USP6NLQ92738 AC079602.3-201ENST00000623931 403 ntBASIC21.6■■□□□ 1.05
USP6NLQ92738 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.6■■□□□ 1.05
USP6NLQ92738 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USP6NLQ92738 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.6■■□□□ 1.05
USP6NLQ92738 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.6■■□□□ 1.05
USP6NLQ92738 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms