Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SMARCC2Q8TAQ2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.18
SMARCC2Q8TAQ2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
SMARCC2Q8TAQ2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
SMARCC2Q8TAQ2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 CR392000.1-201ENST00000624770 1228 ntBASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 RNF165-205ENST00000588679 2904 ntBASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 AIRN-201ENST00000601203 4374 ntBASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.39■■□□□ 1.17
SMARCC2Q8TAQ2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 KSR1P1-201ENST00000446298 240 ntBASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 AC026471.5-201ENST00000615068 467 ntBASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.38■■□□□ 1.17
SMARCC2Q8TAQ2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 AL355355.2-201ENST00000442321 338 ntBASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SMARCC2Q8TAQ2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms