Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 GPAT2P1-201ENST00000444924 1672 ntBASIC14.87□□□□□ -0.03
LINC01006Q8NI28 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01006Q8NI28 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 AL645929.1-201ENST00000420084 975 ntBASIC14.86□□□□□ -0.03
LINC01006Q8NI28 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01006Q8NI28 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AC026396.1-201ENST00000419388 421 ntBASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AC092597.1-201ENST00000487352 616 ntBASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AC024243.1-201ENST00000609234 778 ntBASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01006Q8NI28 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms