Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 AC004951.3-201ENST00000418645 1148 ntBASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 CD177P1-201ENST00000606252 935 ntBASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SRFBP1Q8NEF9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 KRT8P41-201ENST00000533985 1514 ntBASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SRFBP1Q8NEF9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 FSCN1P1-201ENST00000568912 1481 ntBASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 AL049637.2-201ENST00000641778 930 ntBASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.22■□□□□ 0.51
SRFBP1Q8NEF9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 FP475955.4-201ENST00000623131 1990 ntBASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 FAM197Y1-201ENST00000421178 764 ntBASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 AC008550.1-201ENST00000511500 884 ntBASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 PRSS44-201ENST00000515154 1146 ntBASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 RCC2P6-201ENST00000526625 1557 ntBASIC18.21■□□□□ 0.51
SRFBP1Q8NEF9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.21■□□□□ 0.5
SRFBP1Q8NEF9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 FEM1AP3-201ENST00000403722 1741 ntBASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRFBP1Q8NEF9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms