Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC33Q8N5R6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC33Q8N5R6 KRT18P22-201ENST00000402024 1347 ntBASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AC113347.1-201ENST00000413321 391 ntBASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 YBX1P10-201ENST00000444752 975 ntBASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AL031985.4-201ENST00000642138 673 ntBASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC33Q8N5R6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC33Q8N5R6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 AL137013.1-201ENST00000432946 1228 ntBASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 C1QL1P1-201ENST00000568105 661 ntBASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 AL590326.2-201ENST00000625139 305 ntBASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC33Q8N5R6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms