Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AP002414.4-201ENST00000589764 1148 ntBASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC44A3Q8N4M1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 KRT8P26-201ENST00000534154 1276 ntBASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC44A3Q8N4M1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 AL162741.1-201ENST00000565563 1558 ntBASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 AL691432.2-201ENST00000607222 2038 ntBASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC44A3Q8N4M1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 IFNL4P1-201ENST00000607083 540 ntBASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC44A3Q8N4M1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 AC020907.5-201ENST00000624372 1936 ntBASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms