Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LTBP4Q8N2S1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
LTBP4Q8N2S1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
LTBP4Q8N2S1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC26.65■■□□□ 1.86
LTBP4Q8N2S1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC26.65■■□□□ 1.86
LTBP4Q8N2S1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC26.65■■□□□ 1.86
LTBP4Q8N2S1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LTBP4Q8N2S1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LTBP4Q8N2S1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
LTBP4Q8N2S1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 HIST2H3DP1-201ENST00000401004 416 ntBASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 MIR3180-5-201ENST00000583743 153 ntBASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 Z83851.2-201ENST00000609564 659 ntBASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 C1orf229-201ENST00000623686 2258 ntBASIC26.63■■□□□ 1.85
LTBP4Q8N2S1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 AC124864.1-201ENST00000623408 392 ntBASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTBP4Q8N2S1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 POM121L3P-201ENST00000419331 1163 ntBASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 AC121338.2-201ENST00000622535 1744 ntBASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC26.61■■□□□ 1.85
LTBP4Q8N2S1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 PON3-203ENST00000427422 894 ntTSL 3 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTBP4Q8N2S1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 AC211486.1-202ENST00000416371 468 ntBASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 AC211476.1-201ENST00000503899 468 ntBASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC26.59■■□□□ 1.85
LTBP4Q8N2S1 AL591684.3-201ENST00000605187 298 ntBASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms