Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.58■■□□□ 1.21
USP50Q70EL3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.58■■□□□ 1.21
USP50Q70EL3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP50Q70EL3 Z69720.1-201ENST00000601483 472 ntBASIC22.58■■□□□ 1.21
USP50Q70EL3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.58■■□□□ 1.21
USP50Q70EL3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
USP50Q70EL3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
USP50Q70EL3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
USP50Q70EL3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
USP50Q70EL3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
USP50Q70EL3 LINC00167-201ENST00000530583 1419 ntBASIC22.57■■□□□ 1.2
USP50Q70EL3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
USP50Q70EL3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.57■■□□□ 1.2
USP50Q70EL3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
USP50Q70EL3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.57■■□□□ 1.2
USP50Q70EL3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.57■■□□□ 1.2
USP50Q70EL3 AP001005.1-201ENST00000571755 1248 ntBASIC22.57■■□□□ 1.2
USP50Q70EL3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.57■■□□□ 1.2
USP50Q70EL3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.57■■□□□ 1.2
USP50Q70EL3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP50Q70EL3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.57■■□□□ 1.2
USP50Q70EL3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.56■■□□□ 1.2
USP50Q70EL3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC22.56■■□□□ 1.2
USP50Q70EL3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.56■■□□□ 1.2
USP50Q70EL3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.56■■□□□ 1.2
USP50Q70EL3 AC092183.1-201ENST00000469884 875 ntBASIC22.56■■□□□ 1.2
USP50Q70EL3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.56■■□□□ 1.2
USP50Q70EL3 RNA5SP419-201ENST00000515908 135 ntBASIC22.56■■□□□ 1.2
USP50Q70EL3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.56■■□□□ 1.2
USP50Q70EL3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.56■■□□□ 1.2
USP50Q70EL3 AC005332.3-201ENST00000589904 676 ntBASIC22.56■■□□□ 1.2
USP50Q70EL3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 REXO1L6P-202ENST00000619970 1078 ntBASIC22.56■■□□□ 1.2
USP50Q70EL3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP50Q70EL3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
USP50Q70EL3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.56■■□□□ 1.2
USP50Q70EL3 AC104417.2-201ENST00000562989 1793 ntBASIC22.55■■□□□ 1.2
USP50Q70EL3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.55■■□□□ 1.2
USP50Q70EL3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP50Q70EL3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP50Q70EL3 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.55■■□□□ 1.2
USP50Q70EL3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.55■■□□□ 1.2
USP50Q70EL3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
USP50Q70EL3 IGHV3-47-201ENST00000425060 335 ntBASIC22.55■■□□□ 1.2
USP50Q70EL3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP50Q70EL3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.55■■□□□ 1.2
USP50Q70EL3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
USP50Q70EL3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
USP50Q70EL3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
USP50Q70EL3 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.55■■□□□ 1.2
USP50Q70EL3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.55■■□□□ 1.2
USP50Q70EL3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.55■■□□□ 1.2
USP50Q70EL3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP50Q70EL3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP50Q70EL3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP50Q70EL3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
USP50Q70EL3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USP50Q70EL3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP50Q70EL3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP50Q70EL3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP50Q70EL3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.54■■□□□ 1.2
USP50Q70EL3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.54■■□□□ 1.2
USP50Q70EL3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP50Q70EL3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
USP50Q70EL3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP50Q70EL3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.54■■□□□ 1.2
USP50Q70EL3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.54■■□□□ 1.2
USP50Q70EL3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
USP50Q70EL3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
USP50Q70EL3 AL390719.2-201ENST00000606993 987 ntBASIC22.54■■□□□ 1.2
USP50Q70EL3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP50Q70EL3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
USP50Q70EL3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USP50Q70EL3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.54■■□□□ 1.2
USP50Q70EL3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
USP50Q70EL3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.53■■□□□ 1.2
USP50Q70EL3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
USP50Q70EL3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP50Q70EL3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP50Q70EL3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.53■■□□□ 1.2
USP50Q70EL3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.53■■□□□ 1.2
USP50Q70EL3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP50Q70EL3 KRT18P58-201ENST00000527480 1120 ntBASIC22.53■■□□□ 1.2
USP50Q70EL3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.53■■□□□ 1.2
USP50Q70EL3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms