Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTCHD4Q6ZW05 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTCHD4Q6ZW05 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.58■□□□□ 0.4
PTCHD4Q6ZW05 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 MIR935-201ENST00000401179 91 ntBASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 ZNF815P-204ENST00000434898 1737 ntBASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTCHD4Q6ZW05 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 AC116351.2-201ENST00000606540 1585 ntBASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 AC093525.10-201ENST00000625130 1569 ntBASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
PTCHD4Q6ZW05 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms