Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 AC134043.2-201ENST00000624206 2238 ntBASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDPF1Q6NVV7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 AL161938.1-201ENST00000569833 2180 ntBASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDPF1Q6NVV7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 PCDHA1-201ENST00000378133 2726 ntBASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDPF1Q6NVV7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 KRT18P5-201ENST00000436075 1291 ntBASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDPF1Q6NVV7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 LINC02228-203ENST00000641970 1355 ntBASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.5□□□□□ -0.09
CDPF1Q6NVV7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms