Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 AC092667.1-201ENST00000434301 2586 ntBASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 FDX1P1-201ENST00000449115 551 ntBASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 AC092329.2-201ENST00000598402 547 ntBASIC28.97■■■□□ 2.23
CDC42BPAQ5VT25 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 AL136038.4-201ENST00000603606 1261 ntBASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDC42BPAQ5VT25 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 TSSC2-201ENST00000450217 709 ntBASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 MIR3917-201ENST00000580971 93 ntBASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDC42BPAQ5VT25 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC28.95■■■□□ 2.22
CDC42BPAQ5VT25 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
CDC42BPAQ5VT25 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
CDC42BPAQ5VT25 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 TEN1-204ENST00000588202 862 ntTSL 3 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDC42BPAQ5VT25 AL391807.1-203ENST00000604392 2365 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 UNC93B7-201ENST00000509439 705 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 AC012615.1-201ENST00000565797 1299 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 RNF126P1-202ENST00000569893 925 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 AP002414.4-201ENST00000589764 1148 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 AL031008.1-201ENST00000619963 541 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 KRT8P3-201ENST00000519669 1449 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 LBX2-AS1-202ENST00000603175 2083 ntBASIC28.93■■■□□ 2.22
CDC42BPAQ5VT25 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 KRT8P26-201ENST00000534154 1276 ntBASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 CIB2-208ENST00000560618 804 ntTSL 2 BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC28.92■■■□□ 2.22
CDC42BPAQ5VT25 ENSA-205ENST00000361532 792 ntTSL 2 BASIC28.91■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms