Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN5P54829 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN5P54829 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN5P54829 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN5P54829 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN5P54829 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN5P54829 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN5P54829 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 AP000523.1-201ENST00000398242 1049 ntBASIC19.74■□□□□ 0.75
PTPN5P54829 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN5P54829 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.74■□□□□ 0.75
PTPN5P54829 AL160237.2-201ENST00000556165 472 ntBASIC19.74■□□□□ 0.75
PTPN5P54829 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN5P54829 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN5P54829 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN5P54829 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN5P54829 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PTPN5P54829 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN5P54829 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTPN5P54829 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN5P54829 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.73■□□□□ 0.75
PTPN5P54829 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.73■□□□□ 0.75
PTPN5P54829 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN5P54829 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN5P54829 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN5P54829 AL023803.3-201ENST00000615559 522 ntBASIC19.73■□□□□ 0.75
PTPN5P54829 AL031008.1-201ENST00000619963 541 ntBASIC19.73■□□□□ 0.75
PTPN5P54829 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN5P54829 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 AL391422.3-201ENST00000603791 2761 ntBASIC19.73■□□□□ 0.75
PTPN5P54829 LINC01311-201ENST00000565162 1445 ntBASIC19.73■□□□□ 0.75
PTPN5P54829 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PTPN5P54829 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN5P54829 RCC2P6-201ENST00000526625 1557 ntBASIC19.73■□□□□ 0.75
PTPN5P54829 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PTPN5P54829 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN5P54829 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN5P54829 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN5P54829 AC004951.3-201ENST00000418645 1148 ntBASIC19.72■□□□□ 0.75
PTPN5P54829 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPN5P54829 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN5P54829 AL353719.1-201ENST00000566847 864 ntBASIC19.72■□□□□ 0.75
PTPN5P54829 IFNL4P1-201ENST00000607083 540 ntBASIC19.72■□□□□ 0.75
PTPN5P54829 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 AC018553.1-201ENST00000616682 1458 ntBASIC19.72■□□□□ 0.75
PTPN5P54829 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN5P54829 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPN5P54829 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PTPN5P54829 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN5P54829 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PTPN5P54829 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN5P54829 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN5P54829 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN5P54829 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN5P54829 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN5P54829 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTPN5P54829 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN5P54829 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN5P54829 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN5P54829 AC092183.1-201ENST00000469884 875 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms