Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.03■□□□□ 0.64
NUBP1P53384 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NUBP1P53384 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NUBP1P53384 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.03■□□□□ 0.64
NUBP1P53384 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NUBP1P53384 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC19.03■□□□□ 0.64
NUBP1P53384 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC19.03■□□□□ 0.64
NUBP1P53384 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.03■□□□□ 0.64
NUBP1P53384 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NUBP1P53384 VENTXP7-201ENST00000475503 772 ntBASIC19.03■□□□□ 0.64
NUBP1P53384 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC19.03■□□□□ 0.64
NUBP1P53384 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.03■□□□□ 0.64
NUBP1P53384 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NUBP1P53384 TP73-AS1-207ENST00000624167 988 ntBASIC19.03■□□□□ 0.64
NUBP1P53384 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.03■□□□□ 0.64
NUBP1P53384 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.03■□□□□ 0.64
NUBP1P53384 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUBP1P53384 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.03■□□□□ 0.64
NUBP1P53384 AL121603.2-201ENST00000557373 2117 ntBASIC19.03■□□□□ 0.64
NUBP1P53384 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NUBP1P53384 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NUBP1P53384 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.02■□□□□ 0.64
NUBP1P53384 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.02■□□□□ 0.64
NUBP1P53384 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC19.02■□□□□ 0.64
NUBP1P53384 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
NUBP1P53384 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.02■□□□□ 0.64
NUBP1P53384 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.02■□□□□ 0.64
NUBP1P53384 AC027796.2-201ENST00000575326 344 ntBASIC19.02■□□□□ 0.64
NUBP1P53384 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.02■□□□□ 0.64
NUBP1P53384 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.02■□□□□ 0.64
NUBP1P53384 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.02■□□□□ 0.64
NUBP1P53384 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.02■□□□□ 0.64
NUBP1P53384 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.02■□□□□ 0.64
NUBP1P53384 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUBP1P53384 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NUBP1P53384 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NUBP1P53384 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NUBP1P53384 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NUBP1P53384 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.02■□□□□ 0.63
NUBP1P53384 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.01■□□□□ 0.63
NUBP1P53384 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
NUBP1P53384 LINC00167-201ENST00000530583 1419 ntBASIC19.01■□□□□ 0.63
NUBP1P53384 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 MIR564-202ENST00000385049 94 ntBASIC19.01■□□□□ 0.63
NUBP1P53384 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NUBP1P53384 RPL13AP23-201ENST00000480739 586 ntBASIC19.01■□□□□ 0.63
NUBP1P53384 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.01■□□□□ 0.63
NUBP1P53384 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.01■□□□□ 0.63
NUBP1P53384 HMGB1P8-201ENST00000558211 949 ntBASIC19.01■□□□□ 0.63
NUBP1P53384 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.01■□□□□ 0.63
NUBP1P53384 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.01■□□□□ 0.63
NUBP1P53384 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.01■□□□□ 0.63
NUBP1P53384 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.01■□□□□ 0.63
NUBP1P53384 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NUBP1P53384 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC19.01■□□□□ 0.63
NUBP1P53384 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NUBP1P53384 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NUBP1P53384 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NUBP1P53384 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
NUBP1P53384 Z83836.1-201ENST00000624605 1642 ntBASIC19■□□□□ 0.63
NUBP1P53384 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19■□□□□ 0.63
NUBP1P53384 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19■□□□□ 0.63
NUBP1P53384 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 POM121L3P-201ENST00000419331 1163 ntBASIC19■□□□□ 0.63
NUBP1P53384 AC098831.1-202ENST00000438821 336 ntBASIC19■□□□□ 0.63
NUBP1P53384 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19■□□□□ 0.63
NUBP1P53384 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19■□□□□ 0.63
NUBP1P53384 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms