Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.87■□□□□ 0.61
NELFEP18615 ECEL1P3-201ENST00000427961 737 ntBASIC18.87■□□□□ 0.61
NELFEP18615 KSR1P1-201ENST00000446298 240 ntBASIC18.87■□□□□ 0.61
NELFEP18615 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.87■□□□□ 0.61
NELFEP18615 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
NELFEP18615 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.87■□□□□ 0.61
NELFEP18615 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.87■□□□□ 0.61
NELFEP18615 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
NELFEP18615 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.87■□□□□ 0.61
NELFEP18615 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.87■□□□□ 0.61
NELFEP18615 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NELFEP18615 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.87■□□□□ 0.61
NELFEP18615 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.87■□□□□ 0.61
NELFEP18615 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NELFEP18615 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NELFEP18615 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NELFEP18615 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NELFEP18615 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NELFEP18615 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.86■□□□□ 0.61
NELFEP18615 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.86■□□□□ 0.61
NELFEP18615 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NELFEP18615 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 YBX1P10-201ENST00000444752 975 ntBASIC18.86■□□□□ 0.61
NELFEP18615 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.86■□□□□ 0.61
NELFEP18615 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NELFEP18615 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.86■□□□□ 0.61
NELFEP18615 LINC01023-201ENST00000606054 436 ntBASIC18.86■□□□□ 0.61
NELFEP18615 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NELFEP18615 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
NELFEP18615 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.86■□□□□ 0.61
NELFEP18615 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.86■□□□□ 0.61
NELFEP18615 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.86■□□□□ 0.61
NELFEP18615 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NELFEP18615 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
NELFEP18615 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
NELFEP18615 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 AC093484.2-201ENST00000580996 2166 ntBASIC18.85■□□□□ 0.61
NELFEP18615 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.85■□□□□ 0.61
NELFEP18615 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 NUDT16P1-203ENST00000513809 620 ntBASIC18.85■□□□□ 0.61
NELFEP18615 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.85■□□□□ 0.61
NELFEP18615 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NELFEP18615 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NELFEP18615 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
NELFEP18615 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NELFEP18615 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NELFEP18615 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NELFEP18615 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NELFEP18615 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.84■□□□□ 0.61
NELFEP18615 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.84■□□□□ 0.61
NELFEP18615 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.84■□□□□ 0.61
NELFEP18615 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.84■□□□□ 0.61
NELFEP18615 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.84■□□□□ 0.61
NELFEP18615 C1QL1P1-201ENST00000568105 661 ntBASIC18.84■□□□□ 0.61
NELFEP18615 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.84■□□□□ 0.61
NELFEP18615 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NELFEP18615 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
NELFEP18615 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NELFEP18615 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.84■□□□□ 0.61
NELFEP18615 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms