Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RHOP08100 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.81■□□□□ 0.76
RHOP08100 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.81■□□□□ 0.76
RHOP08100 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.81■□□□□ 0.76
RHOP08100 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.81■□□□□ 0.76
RHOP08100 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
RHOP08100 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RHOP08100 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RHOP08100 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.81■□□□□ 0.76
RHOP08100 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.81■□□□□ 0.76
RHOP08100 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
RHOP08100 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RHOP08100 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHOP08100 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.81■□□□□ 0.76
RHOP08100 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.8■□□□□ 0.76
RHOP08100 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.8■□□□□ 0.76
RHOP08100 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.8■□□□□ 0.76
RHOP08100 HBZP1-201ENST00000354915 429 ntBASIC19.8■□□□□ 0.76
RHOP08100 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.8■□□□□ 0.76
RHOP08100 RASA4DP-201ENST00000460726 1199 ntBASIC19.8■□□□□ 0.76
RHOP08100 CLEC4GP1-201ENST00000596555 870 ntBASIC19.8■□□□□ 0.76
RHOP08100 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHOP08100 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RHOP08100 AC112907.3-201ENST00000577781 2400 ntBASIC19.8■□□□□ 0.76
RHOP08100 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RHOP08100 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.79■□□□□ 0.76
RHOP08100 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.79■□□□□ 0.76
RHOP08100 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 AL023284.2-201ENST00000405850 579 ntBASIC19.79■□□□□ 0.76
RHOP08100 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.79■□□□□ 0.76
RHOP08100 AC034232.1-201ENST00000506026 1064 ntBASIC19.79■□□□□ 0.76
RHOP08100 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RHOP08100 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.79■□□□□ 0.76
RHOP08100 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHOP08100 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 AC036111.1-201ENST00000533973 1582 ntBASIC19.78■□□□□ 0.76
RHOP08100 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
RHOP08100 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 AL450487.1-201ENST00000426799 995 ntBASIC19.78■□□□□ 0.76
RHOP08100 AC092597.1-201ENST00000487352 616 ntBASIC19.78■□□□□ 0.76
RHOP08100 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.78■□□□□ 0.76
RHOP08100 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.78■□□□□ 0.76
RHOP08100 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.78■□□□□ 0.76
RHOP08100 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.78■□□□□ 0.76
RHOP08100 AC024243.1-201ENST00000609234 778 ntBASIC19.78■□□□□ 0.76
RHOP08100 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.78■□□□□ 0.76
RHOP08100 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHOP08100 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RHOP08100 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RHOP08100 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
RHOP08100 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.77■□□□□ 0.76
RHOP08100 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.77■□□□□ 0.76
RHOP08100 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.77■□□□□ 0.76
RHOP08100 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RHOP08100 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHOP08100 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.77■□□□□ 0.76
RHOP08100 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms