Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC099336.1-202ENST00000602961 463 ntBASIC21.83■■□□□ 1.09
ALDH1A1P00352 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ALDH1A1P00352 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.83■■□□□ 1.09
ALDH1A1P00352 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ALDH1A1P00352 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ALDH1A1P00352 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.83■■□□□ 1.08
ALDH1A1P00352 Z83836.1-201ENST00000624605 1642 ntBASIC21.83■■□□□ 1.08
ALDH1A1P00352 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ALDH1A1P00352 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ALDH1A1P00352 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.82■■□□□ 1.08
ALDH1A1P00352 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.82■■□□□ 1.08
ALDH1A1P00352 MIR1233-2-201ENST00000408138 82 ntBASIC21.82■■□□□ 1.08
ALDH1A1P00352 MIR1233-1-201ENST00000408722 82 ntBASIC21.82■■□□□ 1.08
ALDH1A1P00352 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.82■■□□□ 1.08
ALDH1A1P00352 AC092183.1-201ENST00000469884 875 ntBASIC21.82■■□□□ 1.08
ALDH1A1P00352 KRT18P58-201ENST00000527480 1120 ntBASIC21.82■■□□□ 1.08
ALDH1A1P00352 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.82■■□□□ 1.08
ALDH1A1P00352 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.82■■□□□ 1.08
ALDH1A1P00352 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.82■■□□□ 1.08
ALDH1A1P00352 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 AC233702.3-201ENST00000578656 1387 ntBASIC21.82■■□□□ 1.08
ALDH1A1P00352 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ALDH1A1P00352 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 FAM220CP-201ENST00000395253 831 ntBASIC21.81■■□□□ 1.08
ALDH1A1P00352 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.81■■□□□ 1.08
ALDH1A1P00352 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ALDH1A1P00352 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 AKR1C7P-201ENST00000305623 895 ntBASIC21.8■■□□□ 1.08
ALDH1A1P00352 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 REXO1L6P-202ENST00000619970 1078 ntBASIC21.8■■□□□ 1.08
ALDH1A1P00352 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 LINC00167-201ENST00000530583 1419 ntBASIC21.8■■□□□ 1.08
ALDH1A1P00352 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.8■■□□□ 1.08
ALDH1A1P00352 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALDH1A1P00352 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ALDH1A1P00352 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ALDH1A1P00352 AC092865.5-201ENST00000545435 363 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms